Pairwise Alignments

Query, 385 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (975), Expect = e-110
 Identities = 198/368 (53%), Positives = 242/368 (65%), Gaps = 13/368 (3%)

Query: 18  PAPSSAVGFGHWLRTKLFATPKDTVLTVIALALLAYLVPPIIKWLFIDAVWTGSDRFACL 77
           P PS+  G   WLR  LF    +++ T++   L    +  I+ W   +A W+G+ R  C 
Sbjct: 11  PPPSNTTGVVGWLRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNANWSGTTRNDCT 70

Query: 78  TVSQGGALPDGQSGACWAFVSAKLGQFVFGRYPIDERWRPILVMVTFAILLVPMLIPKAP 137
                        GACW F+S +  QF++G YP  E WRP L   T A+ +  +   K P
Sbjct: 71  L-----------EGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAYEKTP 119

Query: 138 FKRLNALALFIILPFIAFFLLIGGVFGLPKVETQLWGGLMVTLILSFFGITVSLPFGILL 197
            +    L    I PF A  LL GGVFGL  VET  WGGL+VTLI++  GI  SLP G+ L
Sbjct: 120 KRGWIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVAL 179

Query: 198 ALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFASIMLPLFLPDGWTFDKFLRALVGVSL 257
           ALGRRS++P+I+ LC ++IEV RG+PLITVLF AS+MLPLFL  G   DK LRAL+GV +
Sbjct: 180 ALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVM 239

Query: 258 FSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVIPGIVNTFIGLF 317
           FS+AYMAEVIRGGLQAIPKGQYE AD+LGL+YW+K  LI+LPQALK+ IP IVNTFIGLF
Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLF 299

Query: 318 KDTSLVSIIGMFDLLGIVTLNQADANWATPVTAMTGYIFAGFVFWIFCFGMSRYSLFMER 377
           KDTSLV IIGMFD+LGI      D NW     A   Y+F   VFWIFCFGMSRYS+++E 
Sbjct: 300 KDTSLVLIIGMFDVLGIGQSANTDPNWLG--FATESYVFVALVFWIFCFGMSRYSIWLEG 357

Query: 378 HLDTGHKR 385
            L TGHKR
Sbjct: 358 KLHTGHKR 365