Pairwise Alignments

Query, 312 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  442 bits (1136), Expect = e-129
 Identities = 207/309 (66%), Positives = 251/309 (81%), Gaps = 2/309 (0%)

Query: 4   KGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFPAL 63
           +GF+TCGVS G+PGFSNP+ KGEW GIDV+YC+ +A AV GD +K KFV L++K+RF AL
Sbjct: 36  QGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLTAKERFTAL 95

Query: 64  QSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCVQT 123
           QSGE+DVL+RNTTWT+ RD++LG NF  VNYYDGQGF+ KK L VKSA EL+GA+VCVQ+
Sbjct: 96  QSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQS 155

Query: 124 GTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLKNPD 183
           GTTTELNLADYF+ + + Y PVVF+  +  +  +D+GRCDV TTDQSGLYA+RL L+ PD
Sbjct: 156 GTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPD 215

Query: 184 DNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSANPDV 243
             +VLPE+ISKEPLGP VRQ DD+WF++  WV YAMVNAEE GITSKNVDE   S NP+V
Sbjct: 216 SAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMKSDNPEV 275

Query: 244 KRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALWTKG 303
           KR+LG  +G K GT LG+ +DW+Y IVK VGNYGE FDR VG+GSPLKI+RG NALW  G
Sbjct: 276 KRILGL-DGPK-GTGLGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDRGVNALWNAG 333

Query: 304 GLQYAPPVR 312
           G  YAPP+R
Sbjct: 334 GFMYAPPIR 342