Pairwise Alignments

Query, 312 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 270 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 12/214 (5%)

Query: 1   MKGKGFVTCGVSAGIPGFSNPDDKG-EWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDR 59
           +K +G + CGV   +  F   D+   +  G DVD C+ IA        K +   ++S  R
Sbjct: 28  IKQRGTLVCGVKDSVVPFGFIDETSKQLVGFDVDICQFIADRA---GVKLEVKTVTSATR 84

Query: 60  FPALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYD-GQGFIAKKGLNVKSALELSGAA 118
            P L  G VD++    T    RD  + F+   + Y+D GQ  + KKG  +KSA +L G  
Sbjct: 85  IPMLTQGSVDLVAATMTHKFERDDVIDFS---ITYFDAGQRLLVKKGGGIKSAADLKGKK 141

Query: 119 VCVQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLK 178
           V    G+T+E N+    K        V F++   A  A   G+ +  TTD+  L  ++  
Sbjct: 142 VATVKGSTSEKNM----KAAQPDCVVVSFDEYPQAFLALKQGKAEAVTTDEPILVGLKNS 197

Query: 179 LKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIV 212
              PD   ++ + I+ EP G  + + D ++ D V
Sbjct: 198 DPEPDKWDIVGDFIASEPYGLGLVENDSKFRDFV 231