Pairwise Alignments

Query, 164 a.a., polypeptide deformylase from Agrobacterium fabrum C58

Subject, 163 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.4 bits (176), Expect = 3e-18
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 5/163 (3%)

Query: 1   MAIRPILPYPHAGLSGICAPVTVFDDHLRELVTDLIDTM-RAAPGVGITAAHIGVLQRVF 59
           MA+  IL  P   L     PV   +  ++  + DLI+TM     G+G+ +  +G    V 
Sbjct: 1   MAVLDILTIPDERLKRKAQPVKDIEA-IQGFIDDLIETMYHTDDGIGLASTQVGSTDAVI 59

Query: 60  VLEL--TPGTILTYINPEITSHSPQTMRHVEGSVSMPGFTDEVERPSTVEVRFQDITGAE 117
           V++L  T    L  +NPEI   S + +   EG +S+PG+  +V R   V+V   D  G  
Sbjct: 60  VIDLSETRDQPLVLVNPEIVEKSGEYVGE-EGCLSIPGYRAKVTRFEKVKVTALDRQGKA 118

Query: 118 QTETAEGFHAICIQHEIDQLDGIFWLKRLSRLKRDRLVKKWEK 160
                + F AI +QHEID L G  +++ LS LK+   +KK  K
Sbjct: 119 IEIETDDFLAIVLQHEIDHLHGKVFIEHLSTLKQQIALKKVRK 161