Pairwise Alignments

Query, 788 a.a., formate dehydrogenase H alpha subunit from Agrobacterium fabrum C58

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  128 bits (322), Expect = 9e-34
 Identities = 104/373 (27%), Positives = 166/373 (44%), Gaps = 51/373 (13%)

Query: 73  CPGCAWGDPEHGSSFEFCENGVKAVSWEATEARVPPDFFARHTVSELR-----SWSDYDL 127
           CP C  G          C  GV  V  + T     P  F RH V+E +     S+    +
Sbjct: 10  CPYCGTG----------C--GVDLVVKDGTLVGTNP--FKRHPVNEGKTCIKGSYCHEFV 55

Query: 128 EKQGRLTHPMRYDRASDTYLPVSWDDAFAEIGRILNSLDSPDRAEFYTSGRASNEAAFLY 187
            +  RL  P+   R +   +  SWD+A   I   L +  SP+   F++S R +NE  +++
Sbjct: 56  HRDDRLKTPLI--RKNGELVEASWDEALELISGKLQNY-SPEEVGFFSSARCTNEDNYVF 112

Query: 188 QLMVR-LYGTNNFPDCSNMCHEASGVGLNASIGVGKGTVLLEDFEQTDAIFVIGQNPGTN 246
           Q   R +  TNN   C+ + H A+ VGL  + G G  T  + D E  D IF+IG N    
Sbjct: 113 QKFARTVIKTNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFIIGSNTFEQ 172

Query: 247 HPRMLGDLRRAALRGARIAVFNPIREKGLERFADPQDKIEMITGSSTKIATNYYQPRQGG 306
           HP +   + RA  +G +I V +P       R+             + K A  Y Q   G 
Sbjct: 173 HPLIARRVVRAKEKGTKIIVIDP-------RYTP-----------TAKQADLYLQLLPGT 214

Query: 307 DMAAVRGMSKAVFAADDAARAAGEPAIIDYDFIADHAAEFEAYRAAVDATSWESILDQSG 366
           ++A +  +   +   +          ++D +FI +    +E  +  ++  + E     SG
Sbjct: 215 NIAVLNAIMHVLVKEN----------LVDEEFIKNRTKGYEELKTTLETYTPEYASKLSG 264

Query: 367 LTRAEIEEAAGIYMNAGSVIATWAMGVTQHRHSVLIVREIANFMLLRGNVGRPGAGLCPV 426
           +    I EAA +Y +A +    + MG+TQ    V  V+   N  ++ GN+G+PG G+ P+
Sbjct: 265 VAPELIVEAAKMYGSANAASILYCMGITQFTTGVNNVKSCCNLAMITGNIGKPGTGVNPL 324

Query: 427 RGHSNVQGDRTVG 439
           RG +NVQG   +G
Sbjct: 325 RGQNNVQGACDMG 337



 Score = 25.8 bits (55), Expect = 0.008
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 208 EASGVGLNASIGVGKGTVLLEDFEQTDAIFVIGQNPGTNHP 248
           EA    ++ ++G+    +L +  EQ   I+V+G+NP  + P
Sbjct: 358 EAWNTCVDPNVGLSIPDMLAKAGEQVKCIYVMGENPMVSDP 398