Pairwise Alignments

Query, 540 a.a., cytochrome-c oxidase, FixN chain from Agrobacterium fabrum C58

Subject, 474 a.a., cytochrome c oxidase, cbb3-type, subunit I from Pseudomonas stutzeri RCH2

 Score =  619 bits (1597), Expect = 0.0
 Identities = 285/456 (62%), Positives = 360/456 (78%), Gaps = 3/456 (0%)

Query: 65  NSEYFDEVVKYGVIATVFWGVVGFLVGVVVALQLAFPDLNI-APYFNFGRMRPLHTSAVI 123
           ++ Y  +VV+   I TV WG+VG  +GV +A QLA+P LN+  P+ +FGR+RPLHT+AVI
Sbjct: 6   STAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNLDLPWTSFGRLRPLHTNAVI 65

Query: 124 FAFGGNALIATSFYVVQRTCRARLFGGNLGWFVFWGYNLFIIMAATGYLLGITQGREYAE 183
           FAFGG AL ATS+Y VQRTC+  LF   L  F FWG+ L I++AA    LG T  +EYAE
Sbjct: 66  FAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAE 125

Query: 184 PEWYVDIWLTIVWVAYLATFLGTILTRKEPHIYVANWFYLSFIVTIAMLHIVNNLAVPVS 243
            EW +DI +TIVWVAY   F GT+ TRK  HIYV NWF+ +FI+T+A+LHIVNNL +PV+
Sbjct: 126 LEWPIDILITIVWVAYAIVFFGTLATRKVKHIYVGNWFFGAFILTVAILHIVNNLEIPVT 185

Query: 244 FLGVKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIH 303
              +KSYS ++G  DA+ QWWYGHNAVGFFLTAGFLG+MYYF+PKQ  RPVYSYRLSI+H
Sbjct: 186 --AMKSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVH 243

Query: 304 FWALIFMYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRT 363
           FWALI +YIWAGPHHLHYTALPDWAQ+LGMV S++L  PSWGGMING+MTLSGAW K+R+
Sbjct: 244 FWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRS 303

Query: 364 DPIVRMMVMAVAFYGMATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGAIY 423
           DPI+R +V+++AFYGM+TFEGPMM+IK VN+LSHYTDWTIGHVH+GALGW  M++ GA+Y
Sbjct: 304 DPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALY 363

Query: 424 YLTPKLWGRDRLYSLQLVNWHFWLATLGIVVYAAVMWVAGIQQALMWREYDSQGFLVYSF 483
           +L PK++GR +++S+ L+N HFWLAT+G V+Y A MWV GI Q LMWR  +  G L YSF
Sbjct: 364 HLIPKVFGRAQMHSVALINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSF 423

Query: 484 AESVAALFPYYVMRALGGLMFLSGALIMAYNVTMTI 519
            E++ A  P +V+R +GG +F +G L+MAYN   T+
Sbjct: 424 VEALEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTV 459