Pairwise Alignments

Query, 540 a.a., cytochrome-c oxidase, FixN chain from Agrobacterium fabrum C58

Subject, 480 a.a., Cytochrome c oxidase cbb3-type, subunit I from Pseudomonas syringae pv. syringae B728a

 Score =  605 bits (1559), Expect = e-177
 Identities = 285/449 (63%), Positives = 344/449 (76%), Gaps = 3/449 (0%)

Query: 72  VVKYGVIATVFWGVVGFLVGVVVALQLAFPDLNIA-PYFNFGRMRPLHTSAVIFAFGGNA 130
           VV+   I TV WGVVG  +GV +A QL +P LN+   +  FGR+RPLHT+ VIFAFGG A
Sbjct: 14  VVRQFAIMTVVWGVVGMSLGVFIASQLVWPGLNLELEWTTFGRLRPLHTNLVIFAFGGCA 73

Query: 131 LIATSFYVVQRTCRARLFGGNLGWFVFWGYNLFIIMAATGYLLGITQGREYAEPEWYVDI 190
           L ATS+YVVQRTC+ RL    L  F FWG+   I+ A     +G T  +EYAE EW V I
Sbjct: 74  LFATSYYVVQRTCQTRLISDGLAAFTFWGWQAVIVGAIVTLPMGYTTTKEYAELEWPVAI 133

Query: 191 WLTIVWVAYLATFLGTILTRKEPHIYVANWFYLSFIVTIAMLHIVNNLAVPVSFLGVKSY 250
            L IVW AY A F GTI+ R+  HIYVANWFY +FIV   MLHIVN++++PVS    KSY
Sbjct: 134 LLAIVWAAYAAVFFGTIVKRRTRHIYVANWFYGAFIVVTGMLHIVNHISLPVSLF--KSY 191

Query: 251 SAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIHFWALIFM 310
           SA++G  DA+ QWWYGHNAVGFFLT GFLGMMYYF+PKQ  RPVYSYRLSI+HFWALI +
Sbjct: 192 SAYAGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPVYSYRLSIVHFWALITL 251

Query: 311 YIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPIVRMM 370
           YIWAGPHHLHYTALPDWAQ+LGMV SI+L +PSWGGMING+MTLSGAW K+RTD ++R +
Sbjct: 252 YIWAGPHHLHYTALPDWAQSLGMVMSIILLVPSWGGMINGMMTLSGAWHKLRTDSVLRFL 311

Query: 371 VMAVAFYGMATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGAIYYLTPKLW 430
           V+++AFYGM+TFEGPMM+IK VNSLSHYTDWTIGHVH+GALGW  MIT G++Y++ PKL+
Sbjct: 312 VVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMITIGSVYHMIPKLY 371

Query: 431 GRDRLYSLQLVNWHFWLATLGIVVYAAVMWVAGIQQALMWREYDSQGFLVYSFAESVAAL 490
            R  +YS+ L+N HFWLAT+G V+Y   MWV GI Q LMWR  +  G L YSF E++ A 
Sbjct: 372 ARPHMYSVSLINTHFWLATVGTVLYITSMWVNGITQGLMWRAVNDDGTLTYSFIETMQAS 431

Query: 491 FPYYVMRALGGLMFLSGALIMAYNVTMTI 519
              Y++RA+GG +F SG L+MAYNV  TI
Sbjct: 432 HLGYIVRAIGGAIFTSGMLLMAYNVVRTI 460