Pairwise Alignments

Query, 243 a.a., cytochrome C oxidase, FixO chain from Agrobacterium fabrum C58

Subject, 206 a.a., cytochrome-c oxidase, cbb3-type subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 1e-60
 Identities = 109/226 (48%), Positives = 144/226 (63%), Gaps = 32/226 (14%)

Query: 5   DKHGVIERNATLLLVGSLLVVSIGGIVEIAPLFYLENTIEKVEGMRPYSPLELAGRNIYI 64
           ++H ++ERN  LL +  +  +S G +VEI PL + + T E+V+ ++PY+ L+L GR+IYI
Sbjct: 7   NRHELLERNVGLLAIFIVFAISWGALVEITPLIFQKQTTEEVQNLKPYTALQLEGRDIYI 66

Query: 65  REGCYVCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGDRYSNEWH 124
           REGC VCHSQM+RPFR E ERYGHYS+A ES+++HPF WGSKRTGPDLARVG RYS+EWH
Sbjct: 67  REGCNVCHSQMVRPFRSETERYGHYSVAGESVWEHPFLWGSKRTGPDLARVGGRYSDEWH 126

Query: 125 VQHLANPRSVVPESIMPSYAFLKTTPL--KITDVSMELKANRAVGVPYSDEMIEKSATDL 182
             HL NPR +VPES MP++ +L    L  K T   M L  ++  GVPY+DE I  +  D+
Sbjct: 127 RVHLLNPRELVPESNMPAFPWLAKNTLDGKYTQQKMTLFRDK-FGVPYTDEQIANATKDV 185

Query: 183 HAQADPNADTSELLERYPKAKVGDFDGDPAKLTEMDALVAYLQMLG 228
             +                             TEMDA++AYLQ LG
Sbjct: 186 EGK-----------------------------TEMDAIIAYLQSLG 202