Pairwise Alignments

Query, 287 a.a., cytochrome-c oxidase, FixP chain from Agrobacterium fabrum C58

Subject, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (405), Expect = 3e-44
 Identities = 103/295 (34%), Positives = 143/295 (48%), Gaps = 33/295 (11%)

Query: 13  ETTGHEWDGIRELNNPMPRWWVWTFYFTILWAIGYTIAYPA---WP-LINGAT------- 61
           ET GH +DGI E +NP+P+WW   F  TI++A+GY + YP    W  L+ G         
Sbjct: 38  ETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLVLYPGLGNWKGLLPGYNYLDTEKQ 97

Query: 62  ----QGLLGWSSRGEIAAEIADAKQSQSVYVDKIANSSLAEIQADPTLMQFALSGGAAAF 117
                G  GW+   E   E+A +         K A+  + E+  DP     AL  G   F
Sbjct: 98  TAFANGQTGWTGVHEWEKEMARSDAKFGPIFAKFASMPIEEVAKDPQ----ALKMGGRLF 153

Query: 118 KVNCIQCHGSGAEGGQGYPNLNDDDWMWGGSVDDIYTTVKHGIRFADDADTRASEMPAFG 177
             NC  CHGS A+G  G+PNL D DW WGG  + I TT+  G         R + MP + 
Sbjct: 154 ASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGG---------RHAVMPGWA 204

Query: 178 DILKSDEIRAVAAYVVSLTGTPSNP--ALVEP--GKQLFADNCASCHGEDAKGNREFGAP 233
            ++    +  VAAY+V+   +   P  A  +P  G++LFA NC +CHG   KG    GAP
Sbjct: 205 AVVGEQGVADVAAYLVTSLHSRKLPEGAKADPANGQKLFAANCVACHGPAGKGTPAMGAP 264

Query: 234 NLA-DAIWLKAHGEEGIVAQIRSPKHGVMPAWGERLGDTTVKQLAIFVHSLGGGE 287
           +L   A ++       +   IR  + G MPA  +  G+  V  LA +V+SL  GE
Sbjct: 265 DLTHPAGFIYGSSFAQLQQTIRYGRQGQMPAQADLQGNDKVHLLAAYVYSLSHGE 319



 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 111 SGGAAAFKVNCIQCHGSGAEG--GQGYPNLNDD-DWMWGGSVDDIYTTVKHGIRFADDAD 167
           + G   F  NC+ CHG   +G    G P+L     +++G S   +  T+++G        
Sbjct: 237 ANGQKLFAANCVACHGPAGKGTPAMGAPDLTHPAGFIYGSSFAQLQQTIRYG-------- 288

Query: 168 TRASEMPAFGDILKSDEIRAVAAYVVSLTGTPSNPA 203
            R  +MPA  D+  +D++  +AAYV SL+     PA
Sbjct: 289 -RQGQMPAQADLQGNDKVHLLAAYVYSLSHGEKAPA 323