Pairwise Alignments

Query, 287 a.a., cytochrome-c oxidase, FixP chain from Agrobacterium fabrum C58

Subject, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 5e-54
 Identities = 114/302 (37%), Positives = 153/302 (50%), Gaps = 48/302 (15%)

Query: 16  GHEWDGIRELNNPMPRWWVWTFYFTILWAIGYTIAYPAWPLINGATQGLLGWSSRG---- 71
           GHE+DGIRELNNP+P+WW + F  T ++A  Y   YP      G+ +G+LGW S      
Sbjct: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGL----GSFKGILGWQSSDQTVR 96

Query: 72  ---EIAAEIADAKQSQSV----------------------YVDKIAN-SSLAEIQADPTL 105
              E  A IA A+Q++ +                      Y D   N   + +I AD   
Sbjct: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSD- 155

Query: 106 MQFALSGGAAAFKVNCIQCHGSGAEGGQGYPNLNDDDWMWGGSVDDIYTTVKHGIRFADD 165
              AL  G   F  NC QCHGS A G +G+PNL DD W++GG    I TT++HG      
Sbjct: 156 ---ALKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG------ 206

Query: 166 ADTRASEMPAFGDILKSDEIRAVAAYVVSLTGTPSNPALVEPGKQLFADNCASCHGEDAK 225
              R  +MPA+ DIL    ++ V +Y +SL+G   N    E GK  FA  C++CHG D K
Sbjct: 207 ---RIGQMPAWKDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGK 262

Query: 226 GNREFGAPNLADAIWLKAHGEEGIVAQIRSPKHGVMPAWGERLGDTTVKQLAIFVHSLGG 285
           GN  FGAPNL D  WL       +   + + + GVMPAW   LG+  ++ +A +V SL  
Sbjct: 263 GNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSLSN 322

Query: 286 GE 287
            E
Sbjct: 323 SE 324