Pairwise Alignments

Query, 336 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score =  353 bits (906), Expect = e-102
 Identities = 173/319 (54%), Positives = 226/319 (70%), Gaps = 2/319 (0%)

Query: 14  AVAPMIDWTDTRCRFLHRQLSKRALLFTEMIVADAIIHGQREKLLGYHPQEHPVALQLGG 73
           +VAPM+DWTD  CR+ HR LS + LL+TEM+   AIIHG R   L Y+ +EHPVALQ GG
Sbjct: 8   SVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHG-RGDFLAYNQEEHPVALQFGG 66

Query: 74  SNPAKLAEAVRIAGDYGYDEINLNVGCPSDRVQSGTFGACLMREPEVVAQCISAMKAVAA 133
           SNP  LA   ++A + GYDEINLNVGCPSDRVQ+G FGACLM EP++VA+C++AM+AV  
Sbjct: 67  SNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVD 126

Query: 134 VPVTVKCRIGVDDQEPETVLPDFLARVV-AAGADAVWVHARKAWLQGLSPKENREVPPLD 192
           +PVTVK RIG+DDQ+    L  F+A V    G +   +HARKAWL GLSPKENRE+PPLD
Sbjct: 127 IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIPPLD 186

Query: 193 YDLVYRMKRDNPDVFIGINGGIADLDQAGEHLKYVDGVMLGRAAYHNTSILADVDHRIHG 252
           Y   Y++KRD P + I +NGG+  L++A  HL+++DGVM+GR AY N  +LA+VD +I G
Sbjct: 187 YPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQQIFG 246

Query: 253 EEALQYDWMALRDTMMAYAADYIATGGRLNHVTRHMVGLFQGMPGARRFRQILSSDATRP 312
            E        +   MM Y    ++ G  L H+TRHM+GLFQ MPGAR++R+ +S +A +P
Sbjct: 247 LETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISENAHKP 306

Query: 313 GAGPEVIEAAFAAIDFNPM 331
           GAG EV+E A A I +  +
Sbjct: 307 GAGLEVVEQALAKIPYQEL 325