Pairwise Alignments

Query, 906 a.a., DNA gyrase subunit A from Agrobacterium fabrum C58

Subject, 782 a.a., DNA topoisomerase 4 subunit A from Phaeobacter inhibens DSM 17395

 Score =  446 bits (1147), Expect = e-129
 Identities = 278/721 (38%), Positives = 410/721 (56%), Gaps = 48/721 (6%)

Query: 5   YLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDVMGKFHPH 64
           YL YA+S I+ RALPD RDGLKPVHRRILY MS L +     ++K A+++GD MG FHPH
Sbjct: 31  YLTYALSTIMHRALPDARDGLKPVHRRILYAMSRLRLTSTGGFLKSAKISGDTMGDFHPH 90

Query: 65  GNSAIYDALARMAQDWSLRLPLIDGQGNFGSIDGDPPAAERYTECRLEKAAHSLLDDLDK 124
           G++AIYDA+AR+AQD+++R PL+DGQGNFG+IDGD PAA RYTE R+   A ++L+ L +
Sbjct: 91  GDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNPAASRYTEARMTFVAEAMLEGLSE 150

Query: 125 ETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDGCVALIEN 184
             VDFRDNYDG L EP V+PA FPN+L NGA GIAVGMATNIPPHN+ E+ID C+ LI+ 
Sbjct: 151 NAVDFRDNYDGRLTEPAVLPATFPNILANGAAGIAVGMATNIPPHNIGELIDACLHLIKT 210

Query: 185 PAIELPEMMQIIPGPDFPTGALIM-GRSGIRSAYETGRGSVIMRGVATIEPMRGDREQII 243
           P      ++  +PGPDFPTG +I+  +  I  AY TGRGS  +R    +E +   + QI+
Sbjct: 211 PDARDDTLLNYVPGPDFPTGGIIVEPKENIAKAYNTGRGSFRLRCTHEVEDLGRGQWQIV 270

Query: 244 ITEVPYQVNKASMIEKMAELVKEKRIEGISDLRDESDRQGYRVVIELK-RDANAEVILNQ 302
           ITE+PYQV K+ +IEK+AEL++ K+I  ++D+RDES  +  R+V+E K ++ + EV++N 
Sbjct: 271 ITEIPYQVQKSKLIEKIAELIQTKKIPILADVRDES-AEDIRIVLEPKSKNVDPEVLMNM 329

Query: 303 LYRYTPLQTSFGCNM-VALNGGKPEQMTLLDMLRAFVSFREDVVSRRTKYLLRKARDRAH 361
           ++R + L+  F  NM V ++G  P+  ++ ++LRAF+  R DV+ RR+++ + K   R  
Sbjct: 330 MFRNSDLEIRFSLNMNVLIDGVTPKVCSMKEVLRAFLDHRRDVLQRRSQHRMDKIDHRLE 389

Query: 362 VLVGLAISVANIDEVIRVIRHAPDPASAREQLMTRRWPAQDVESLIRLIDDPRHRINED- 420
           VL G  I+  N+D VI +IR+  DP +A   LM   W           +D PR     D 
Sbjct: 390 VLEGFIIAFLNLDRVIDIIRYDDDPKAA---LMRENWS----------LDHPRAYTEADY 436

Query: 421 -----GTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGAEISEYLDILSSRVRIQQ 475
                G   L+E QA AIL +RL  L  L   E+  E + +  E +  +++L+S      
Sbjct: 437 VSPAIGAGELTEVQAEAILNMRLRSLRRLEEIELVRERDALREERAGLVELLASEDLQWS 496

Query: 476 IVKDELVSIRDEFGT-----PRRSQIVEGG--PDMDDEDLIAREDMVVTVSHLGYIKRVP 528
            + ++L   + +FG      PRR++  E G   ++  E +I RE + V  S +G+I+ + 
Sbjct: 497 RIAEQLKDTKKQFGKTYEGGPRRTRFAEAGEVEEVPLEAMIDREPITVVCSQMGWIRAM- 555

Query: 529 LTTYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYKEKVWRLPIGTPQ 588
                       GR  +  +D D    +F A T   +L F+S G  Y      LP G   
Sbjct: 556 ------TGHIDLGRE-LKFKDGDGPRFIFHAETTDRLLVFASNGRFYTISASNLPGGRGM 608

Query: 589 SKGKALINMLPLEPGERITTIMPLPEDETAWETLDVMFSTTRGTVRRNKLGDFVQVNRNG 648
            +   L+  LP E  E +  ++  PE       L V      G +   K  D V   R+G
Sbjct: 609 GEPLRLMVDLPNEV-EIVDILIHNPEGR-----LLVASDAGNGFICAEK--DIVAQTRSG 660

Query: 649 KIAMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGRNSVGVRGINMAE 708
           K  + + ++    + +    D   V + +  G+ + F V+++        V ++  NMA 
Sbjct: 661 KQVLNVKDDDRAKICIRVTGDH--VAVVSENGKFLVFAVEEMPELTRGKGVRLQKYNMAR 718

Query: 709 G 709
           G
Sbjct: 719 G 719