Pairwise Alignments

Query, 499 a.a., penicillin-binding protein from Agrobacterium fabrum C58

Subject, 396 a.a., D-alanyl-D-alanine carboxypeptidase DacC from Phaeobacter inhibens DSM 17395

 Score =  146 bits (369), Expect = 1e-39
 Identities = 92/252 (36%), Positives = 133/252 (52%), Gaps = 7/252 (2%)

Query: 31  LTLAAAFIAATSVQTAKA--DPKYAGIVIDAKSGKVLYGEDPDGLRYPASLTKMMTLYLT 88
           LT AA  + + S  +A A      A  V+D ++  VL  ++ D    PAS++K+MTLY+ 
Sbjct: 14  LTCAAGLLVSLSALSAAAFDTRARAAYVLDQETDTVLLAKNADLALPPASMSKLMTLYVA 73

Query: 89  FEALNSGRISLDSRVTVSANAAKEPPSKLGVRAGGSVTVEQAILALVTRSANDMATALGE 148
           FEA+  GR++LD R+ VS +A     S + +     V VE  +  ++  S ND    L E
Sbjct: 74  FEAIRDGRLTLDERLPVSEHAMSYKGSTMFLNTQDRVRVEDLLRGIIVLSGNDACVVLAE 133

Query: 149 HLG--GSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQ 206
            L   G+E  FAR MT +A+ +GM  +T+ N+NG P      +  D A L   L + FPQ
Sbjct: 134 ALSPDGTEAGFARYMTKRAQEMGMENSTFANSNGWPAAGHRMSVEDLAILAEKLIEDFPQ 193

Query: 207 YYGYFSTRTFNFGKQV---IGNHNRLVGTVKGVDGIKTGYTRAAGSNLATSAQLDGRSIV 263
           YY  F+ R F F  +    + N N L+G   G DG+KTG+T  AG  L  SA    R ++
Sbjct: 194 YYPLFAEREFEFDGRAPSNVRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAAQGDRRVI 253

Query: 264 AVVLGGRSSAAR 275
            V+ G  S+ AR
Sbjct: 254 FVITGLDSTTAR 265