Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas stutzeri RCH2

 Score =  208 bits (529), Expect = 2e-58
 Identities = 115/345 (33%), Positives = 188/345 (54%), Gaps = 6/345 (1%)

Query: 30  TAPFIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPETAY 89
           +AP +A A+   ++DA +G VL+  N D+  PPASL KLMT  +    + KGQ++     
Sbjct: 30  SAPQLA-AKSYLLMDAASGEVLVEHNGDERLPPASLTKLMTAYIATLEIQKGQISDNDMV 88

Query: 90  PVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAAFA 149
            VSE AWRTGG     S MF  + + V ++DLL GII+Q+ ND  + +AE +AGS+ AFA
Sbjct: 89  TVSEKAWRTGG-----SRMFIQVNTQVSVDDLLHGIIIQSGNDASVAMAEHIAGSEEAFA 143

Query: 150 KRMTARAGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDRYALFTKPDFEW 209
             M + A  LGM  + F N+TGLPDP + ++A DM +LA+ +    P  YA++ + +F W
Sbjct: 144 DLMNSAAQRLGMTNTHFMNATGLPDPDHYSSAGDMAKLARAIIYEDPAHYAIYAQKEFFW 203

Query: 210 NRIFQRNKNTLLMPGSGIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKTRQEE 269
           N I Q N+N LL     +DGL  G  E +G+  V SA R+  R+   + G   ++ R  E
Sbjct: 204 NNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCLVASAVRDNMRLISVVFGTDSEQARAAE 263

Query: 270 ARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGGDVSHIDLSPKEDVSVLVPVNNPDRISGR 329
            ++++ +G   FE R  + K   +    V+ G    +     +D+++ +P    +++   
Sbjct: 264 TQKLLTYGFRFFETRTFYQKGTELAQAQVWKGQQDKLKAGLAQDLTMTLPRGQVEKLQAV 323

Query: 330 IVYRWPLNAPLDVGANAGTLKIFSGERLLREVPLYTKTAVGKGSL 374
           + +   L AP+  G   G +++   ++++R   L     + +G L
Sbjct: 324 MSFNGTLIAPIQQGDVIGKVEVKLDDKVVRSTDLVALETIEEGGL 368