Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 67.0 bits (162), Expect = 7e-16
 Identities = 70/251 (27%), Positives = 107/251 (42%), Gaps = 25/251 (9%)

Query: 37  AEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPETAYPVS-EYA 95
           A  A +ID +T  ++ S N D   P AS+ KLMT  V LDA    ++  +   P++ + A
Sbjct: 47  ANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLDA----KLPMDAKLPITIKDA 102

Query: 96  WRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAAFAKRMTAR 155
               G  SR       + S +   D+L   ++ + N     +A    G   AF K M A+
Sbjct: 103 KEMKGVHSRVK-----IGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAK 157

Query: 156 AGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYP---------DRYALFTKPD 206
           A  LGM  + F   TGL    N +TARD+V L +     YP          +   F+KP 
Sbjct: 158 AKALGMKNTRFVEPTGL-SAKNVSTARDLVVLLK-ASKKYPLLGKLSATDKKTVTFSKPR 215

Query: 207 FEWNRIFQRNKNTLLMPGS-GIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKT 265
           +    +  RN N L+   +  ID    GF   +G   V+  +   R+V   +       +
Sbjct: 216 Y---TLDFRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLS 272

Query: 266 RQEEARRVVDW 276
              +A R+  W
Sbjct: 273 PVGDANRLRTW 283