Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (433), Expect = 3e-47
 Identities = 120/393 (30%), Positives = 188/393 (47%), Gaps = 7/393 (1%)

Query: 1   MRKAIHRSYRSAIVVAAFAFFSAGAAQ---SQTAPFIAKAEQAYMIDAETGTVLLSQNED 57
           M+K+I +S  ++ +  +    S   A    +  AP IA A+   ++D  +G VL  +  D
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIA-AKGYVLMDYHSGKVLAEKEMD 59

Query: 58  QSFPPASLAKLMTVEVVLDALSKGQVTPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVG 117
               PASL K+MT  V+   + +G ++      +S+ AW      S  S MF  + ++V 
Sbjct: 60  TKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDS--SKMFVEVGTTVK 117

Query: 118 INDLLTGIIVQNANDGCIIVAEGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPGN 177
           ++DL  GII+Q+ ND C+ +AE +AG++ AF   M A A  LGM  S F+NS GL DP  
Sbjct: 118 VSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNL 177

Query: 178 QTTARDMVRLAQHLHDTYPDRYALFTKPDFEWNRIFQRNKNTLLMPGS-GIDGLGLGFAE 236
            +T  D+  L Q L    P+ YA++++  F +N I Q N+N LL   S  +DG+  G   
Sbjct: 178 YSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTS 237

Query: 237 GSGFAAVVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAV 296
           G+G+  V SA     R+   + G  ++  R+ E+++++ +G   FE        E     
Sbjct: 238 GAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNE 297

Query: 297 SVYGGDVSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWPLNAPLDVGANAGTLKIFSGER 356
           +++ GD   I L   +D  V +P      ++   V    L APL  G   GTL       
Sbjct: 298 TIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLAGN 357

Query: 357 LLREVPLYTKTAVGKGSLTQNATGALKELLLFW 389
            + + PL     V +GSL       L  L   W
Sbjct: 358 DIAQYPLLALEDVQEGSLFSRLWDYLVLLFKSW 390