Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 529 a.a., putative D-alanyl-D-alanine carboxypeptidase from Phaeobacter inhibens DSM 17395

 Score =  140 bits (352), Expect = 1e-37
 Identities = 88/251 (35%), Positives = 129/251 (51%), Gaps = 8/251 (3%)

Query: 30  TAP--FIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPET 87
           TAP   +A    A +IDA TG VL S+N D    PASL K+MT+ +  +A+  G+++ +T
Sbjct: 38  TAPPGAMAAPYAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIAFEAVRNGEISLDT 97

Query: 88  AYPVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAA 147
              +S  A     A  + S +       +    L+    V++AND    + E +AGS+AA
Sbjct: 98  KVKISRNA-----ASEQPSKLGLKTGQRIAFRYLIRAAAVKSANDAATAIGETLAGSEAA 152

Query: 148 FAKRMTARAGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDRYALFTKPDF 207
           FA+RMT  A  LGM+R+ F N+ GL   G+ +TARDM  L +HL   YP+ Y LF++   
Sbjct: 153 FARRMTRTAKALGMSRTTFKNAHGLTQKGHMSTARDMTTLGRHLLYDYPEYYNLFSRRST 212

Query: 208 EWN-RIFQRNKNTLLMPGSGIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKTR 266
           +   R        LL    G DG+  G+   +GF  V SAER   RV   + G     +R
Sbjct: 213 DAGVRKVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGNERVIATVFGGKSSTSR 272

Query: 267 QEEARRVVDWG 277
             +   ++D G
Sbjct: 273 NAKVAELLDLG 283