Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 374 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Marinobacter adhaerens HP15

 Score =  198 bits (504), Expect = 2e-55
 Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 11/365 (3%)

Query: 24  GAAQSQTA-----PFIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDAL 78
           G A SQ+      P IA +    M D ++G +++ +N  +  PPASL K+MT  +V   L
Sbjct: 8   GKAMSQSVLIPSPPQIAGSSYVLM-DPKSGRIIMEENSHERLPPASLTKMMTAYIVEREL 66

Query: 79  SKGQVTPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVA 138
            +G++      P+S  AW+T G  SRT   F    + V + DLL G+I+Q+ ND  + +A
Sbjct: 67  DEGRIAMSDMVPISVNAWKTEG--SRT---FVREGTQVSVEDLLRGVIIQSGNDASVALA 121

Query: 139 EGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDR 198
           E +AGS+ AF   M  +A  LGM  + F N+TGLP P + +TA D+  LA+ + + YP+ 
Sbjct: 122 EFVAGSEGAFVDIMNQQAQLLGMKDTNFVNATGLPSPEHFSTAYDLAMLARAIINDYPEN 181

Query: 199 YALFTKPDFEWNRIFQRNKNTLLMPGSGIDGLGLGFAEGSGFAAVVSAEREGRRVYLALA 258
           Y L+ +  F +N I Q N+N+LL     +DGL  G  E +G+  V SA+R   R    + 
Sbjct: 182 YPLYAEKHFTYNNIRQPNRNSLLWRDDSVDGLKTGHTEEAGYCLVASAKRNDTRFIAVVM 241

Query: 259 GIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGGDVSHIDLSPKEDVSVLV 318
           G    + R +E ++++++G   +E   LF   + +    V+GG    + +   EDV V +
Sbjct: 242 GTNSSEARAQEIQKMLNYGFRYYESERLFRSGQELIEARVWGGQADQLSVGMTEDVYVTI 301

Query: 319 PVNNPDRISGRIVYRWPLNAPLDVGANAGTLKIFSGERLLREVPLYTKTAVGKGSLTQNA 378
           P  + + +   +     + AP+ VG   G +K+     +L + P+   T V +G   +  
Sbjct: 302 PRGSRNDLESTVDLDSVIKAPIKVGDELGRVKVSYNGEVLVDQPVLALTEVPEGGFFKRI 361

Query: 379 TGALK 383
             A+K
Sbjct: 362 WDAIK 366