Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 409 a.a., penicillin-binding protein 6. Serine peptidase. MEROPS family S11 from Paraburkholderia bryophila 376MFSha3.1

 Score =  184 bits (468), Expect = 3e-51
 Identities = 115/377 (30%), Positives = 188/377 (49%), Gaps = 12/377 (3%)

Query: 19  AFFSAGAAQSQTAPFIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDAL 78
           A  +A  A +Q  P    A    ++DA +  VL S N D+   PASL KLMT  +V +AL
Sbjct: 34  ATLAASTAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLMTAYLVFEAL 93

Query: 79  SKGQVTPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVA 138
              ++  +     SE   R     SR   MF      V ++DL+ G+IVQ+ ND  I +A
Sbjct: 94  QTKKIAMDQTVTPSEAVRRVRTDESR---MFVEANKPVTVHDLVYGMIVQSGNDAAIALA 150

Query: 139 EGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDR 198
           E + GS+A F   M   A  LGM  + F++  G+PD  + TTA D+  L+  L   +PD 
Sbjct: 151 ELVGGSEAQFVNMMNTEAQRLGMKNTHFADVNGMPDAQHYTTAGDLAVLSARLIRDFPDY 210

Query: 199 YALFTKPDFEWNRIFQRNKNTLLMPGSGIDGLGLGFAEGSGFAAVVSAERE-------GR 251
           Y +F+  +F +N+I Q N+N LL     +DGL  G  + +G+  + SA+R         R
Sbjct: 211 YNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTQDASR 270

Query: 252 RVYLALAGIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGGDVSHIDLSPK 311
           R+   + G   +  R +++ +++++G +A++   L+   + VG   VY G    + +  K
Sbjct: 271 RLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVCLYKASQVVGTPRVYKGAQDSVQIGVK 330

Query: 312 EDVSVLVPVNNPDRISGRIVYRWPLNAPLDVGANAGTLKIFSGERLLREVPLYTKTAVGK 371
            D  + VP    D++  +I    PL AP+  G   GT K+ +  ++L + P+    AV +
Sbjct: 331 SDQYITVPKGMADKVKPQIEQMDPLIAPIANGQQVGTAKLVADGKVLAQFPIVALQAVPQ 390

Query: 372 GSLTQNATGALKELLLF 388
             +      +L  +L+F
Sbjct: 391 AGVVGRVWDSL--MLMF 405