Pairwise Alignments

Query, 341 a.a., DNA polymerase III, delta prime subunit from Agrobacterium fabrum C58

Subject, 343 a.a., DNA polymerase III subunit delta' from Sinorhizobium meliloti 1021

 Score =  470 bits (1209), Expect = e-137
 Identities = 227/338 (67%), Positives = 281/338 (83%)

Query: 2   SEVQGVLDGAIAPQQNTRLFGHEEAEAFLAQSYRSGKGHHAILIEGPEGIGKATLAFRFA 61
           +E   VL+GA+AP  N++LFGH+EAEAFLAQSYRSGKGHHA+LIEGPEGIGKATLAFRFA
Sbjct: 3   AEQPRVLEGALAPATNSKLFGHQEAEAFLAQSYRSGKGHHAVLIEGPEGIGKATLAFRFA 62

Query: 62  NHVLTHPDPASAPDFLADPDPQSLVSRQITAGASHNLLHLTRPVDEKTGRVKSAITVDEV 121
           NH+L+HPDPA AP+ LADPDP S+V+RQ+ +GASHNLLHL RPVDEKTGR K AITVDEV
Sbjct: 63  NHILSHPDPADAPERLADPDPASMVTRQLASGASHNLLHLARPVDEKTGRAKGAITVDEV 122

Query: 122 RRAGHFFSQTSGTGNWRIVIIDPADDLNRNAANAILKILEEPPKRAMFLVLSHAPGKLLP 181
           RRAG FF QTSGTGNWRIVIIDPADDLNRNAANAILK+LEEPP+R++FLVL+HAPGKLLP
Sbjct: 123 RRAGKFFGQTSGTGNWRIVIIDPADDLNRNAANAILKMLEEPPRRSLFLVLTHAPGKLLP 182

Query: 182 TIRSRCMPLRLLPLSDAAMVQALDQLDISPEGEKRDALLTASKGSVAQALKLMNYGGSDI 241
           TIRSRC+PLRL PL   A+ QAL  L +   G   + +L A+ GSV++ALKL+NYGG DI
Sbjct: 183 TIRSRCLPLRLKPLDTQALRQALAHLGLDLAGPDAERVLAAASGSVSEALKLINYGGLDI 242

Query: 242 VEAFAEVMSAEGPGARKRMHKLAEVLAQKDGDIVLGFFMEHVTEELMERARAAAMAGDIA 301
             AF ++++ +GP ARK MHKLA+VL+ KD + +  FF   ++  +M+ AR AA+AGD+ 
Sbjct: 243 AGAFDDILAGQGPAARKNMHKLADVLSGKDSETIFDFFSSLLSGRIMQLAREAAIAGDVG 302

Query: 302 AAEKHARLSSTLSERITVAQAYNLDKKQMVLSILEDIR 339
            AE+ ARLSS++ ER+ V+ AYNLD+KQ +LS+L+D++
Sbjct: 303 RAERFARLSSSVGERLAVSNAYNLDRKQTILSLLDDLK 340