Pairwise Alignments

Query, 260 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 264 a.a., Putative deoxyribonuclease YcfH from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (497), Expect = 5e-55
 Identities = 109/257 (42%), Positives = 155/257 (60%), Gaps = 6/257 (2%)

Query: 1   MLIDTHCHLDFPDFEAERDDIIARAHAS---GVSQMVTISTRVRRLPELLKIADKYPSVF 57
           ML+D+HCHLD  D  A    + A   A+   GV   + I        ++  +A++Y  V 
Sbjct: 1   MLVDSHCHLDRLDLAAHGGSLDAALDAARERGVGHFLCIGVSADNAADVKALAERYADVD 60

Query: 58  CSVGTHPNNADEELDISADELVRLAESHDKIVAIGEAGLDYFYDTQKPEDQKTGLIRHIE 117
           CSVG HP +   +   + D L+R  + H ++VAIGE GLDY Y+ +  + Q+     H+E
Sbjct: 61  CSVGVHPLDVQPDAAPALDWLLRELD-HPRVVAIGETGLDYHYEPEAADVQQASFRLHLE 119

Query: 118 AARRTKLPLVIHSRSADDDMAAILRAESGKGAFPFILHCFSAGPELAKAGVELGGYVSFS 177
           AAR+T  P++IH+R A  D  A+LR  +   A   +LHCF+   ++AKA +++G Y+S S
Sbjct: 120 AARQTGKPVIIHTRGARADTLALLRDAALPQAG--VLHCFTEDWDMAKAALDMGYYISLS 177

Query: 178 GILTFPKSQDIRDIAATVPLDRLLVETDAPYLAPKRWRGKRNEPSYVVNTAEVLAEVHGV 237
           GI+TF  +  +RD+A+ VP DRLLVETD+PYLAP  +RGK N P YV   AE LA + G 
Sbjct: 178 GIVTFRNADALRDVASKVPADRLLVETDSPYLAPIPYRGKPNLPQYVREVAEFLAMLRGE 237

Query: 238 SFEHMAEITTENAFRCF 254
           S+E  AE TTEN  + F
Sbjct: 238 SYERFAEQTTENFKQLF 254