Pairwise Alignments

Query, 454 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  289 bits (740), Expect = 1e-82
 Identities = 165/474 (34%), Positives = 267/474 (56%), Gaps = 40/474 (8%)

Query: 5   ILVVDDEADIREIVAGILSDEGHETRMAFDSDSALAAISERVPRLIFLDIWMQGSKLDGL 64
           + VVDD++ IR ++   LS    +     D++S L A+    P ++  DI M G  +DG+
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPG--MDGI 63

Query: 65  ALLDEIKSRHPEIPVVMISGHGNIETAVNAIKRGAFDFIEKPFKADRLILIAERALENSK 124
           ALL+++  R PE+PV++++ H +++ AVNA ++GAF+++ KPF  D  + + ERA+ + +
Sbjct: 64  ALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQ 123

Query: 125 LKREVQELKKRTGDAVELVGASLAVSQLRQTIDRVAPTNSRIMILGPSGSGKELVARMVH 184
            +R+          A E++G + A+ ++ + I R++ ++  ++I G SG+GKELVA  +H
Sbjct: 124 EQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALH 183

Query: 185 KKSSRATGPFVALNAATITPDRMEIALFGTEG---LPGQPRKVGALEEAHRGVLYLDEVG 241
           + S RA  PF+ALN A I  D +E  LFG E          + G  E+A+ G L+LDE+G
Sbjct: 184 RHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIG 243

Query: 242 EMPRETQNKILRVLVDQQFERVGGGKRVKVDVRIISSTAHHLESLIAEGQFREDLYHRLA 301
           +MP + Q ++LRVL D QF RVGG   +KVDVRI+++T  +LE L+ +G+FREDL+HRL 
Sbjct: 244 DMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLN 303

Query: 302 VVPVKVPALSERREDIPFLVDMFMRQISEQAGIRPRKIGDDAMAVLQTHDWPGNIRQLRN 361
           V+ + +P+L ERR+DI  L   F+   +++ G+  + +    + +L   DWPGN+RQL N
Sbjct: 304 VIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLEN 363

Query: 362 NIERLMILARPEGGEAPISADMLPSDIGDML-----------------------PKISAQ 398
               L ++A          +++LPSD+   L                           A 
Sbjct: 364 MCRWLTVMAS--------GSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALAS 415

Query: 399 GDQHIMTLPLREAREMFERDYLMAQINRFGGNISRTAEFVGMERSALHRKLKSL 452
           G+  ++   L E    FER  L A ++   G+    A+ +G  R+ L RKLK L
Sbjct: 416 GETELLAYALPE----FERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465