Pairwise Alignments

Query, 483 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  363 bits (933), Expect = e-105
 Identities = 198/471 (42%), Positives = 296/471 (62%), Gaps = 14/471 (2%)

Query: 5   ILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWVSAGEGDLVVTDVVMPDENAFDL 64
           + V DDD++IR V+ + LS A       ++A ++   +     D++V+D+ MP  +   L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 65  LPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALS--EPK 122
           L ++ +  P+LPV++M+A +    A+ A ++GA++YLPKPFD+ E + ++ RA++  + +
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQ 125

Query: 123 RKPAKLDDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDY 182
           RK +    +      ++G + AMQE++R + RL ++ ++++I GESGTGKELVA ALH +
Sbjct: 126 RKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRH 185

Query: 183 GKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIGDM 242
             R   PF+A+NMAAIP+DLIESELFGHEKGAFTGA     GRFEQA GGTLFLDEIGDM
Sbjct: 186 SPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIGDM 245

Query: 243 PMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVV 302
           P+D QTRLLRVL  G++  VGG   I+ DVRIVAAT+++L++ ++QG FREDL++RLNV+
Sbjct: 246 PLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVI 305

Query: 303 PLRLPPLRDRAEDIPDLVRHFIQTGEKE-GLEGKRFETEALEVMKAYAWPGNVRELENLI 361
            + +P LR+R +DI  L +HF+    KE G+E K      ++++    WPGNVR+LEN+ 
Sbjct: 306 RIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMC 365

Query: 362 RRLMALYPQEVITREIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFGDG 421
           R L  +     +    +  EL S+   S  D        ++  + +E   +   AS    
Sbjct: 366 RWLTVMASGSEVLPSDLPSELLSERKASHFD------NDISWQKQLETWAKSALAS---- 415

Query: 422 LPPPGLYDRVLRELEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIREL 472
                L    L E E  L+ AAL  T G++ +AA +LG  RNTL +K++EL
Sbjct: 416 -GETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465