Pairwise Alignments

Query, 382 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (443), Expect = 2e-48
 Identities = 111/357 (31%), Positives = 189/357 (52%), Gaps = 18/357 (5%)

Query: 13  QLAMAVLNAVQNPVILVDGEGFISFANWEAEAFFGASASHLARYRVSTFIPFGSPLLALI 72
           +L+  ++N     V+++D    I +AN  AE  F  SA  L    ++  +   S  L L+
Sbjct: 6   ELSQTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLL 65

Query: 73  DQVRERRAPVNEYRVDLSSPRLGQDKLVDLYVAPVVSEPGSVVV-----VFQERSMADKI 127
            Q  +    + +  V L      +  ++++ V+P+      +++     + Q+R +  ++
Sbjct: 66  TQPLQSGQSITDSDVTLVID--SKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQEL 123

Query: 128 DRQLTHRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLEMSVPDED-RALTRLICDETDR 186
           ++    +AA   V GLA    HEIKNPL G+RGAAQLLE  +PD      T++I ++ DR
Sbjct: 124 NQHAQQQAAKLLVRGLA----HEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADR 179

Query: 187 IVSLVDRMEIFSDERPVDRVPVNIHSVLDHVKAIAKAGFARNIKISENYDPSLPAVYANR 246
           +  LVDR+     +RP ++   N+H +L+ V+ + +     N+    +YDPSLP +  + 
Sbjct: 180 LRGLVDRL--LGPQRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDT 237

Query: 247 DQLVQVFLNLVKNAAEAVANQPDGEVVLTTAYRPGIRLSVAGSRERISLPLEFCVHDNGP 306
           DQ+ Q  LN+V NAA+ + NQ  G + L T  R   + ++ G R ++   +E  + DNGP
Sbjct: 238 DQIEQALLNIVSNAAQILTNQTHGVITLRT--RTVHQANIHGQRHKLVASIE--IIDNGP 293

Query: 307 GVPSDLLPHLFDPFITTKTNGSGLGLALVAKLIGAHGGIVECDSQNHRTTFRVLMPV 363
           G+P +L   LF P ++ +  G+GLGL++   LI  H G +E  S   RT F + +P+
Sbjct: 294 GIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPI 350