Pairwise Alignments

Query, 338 a.a., nitrogen regulation protein from Agrobacterium fabrum C58

Subject, 335 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  258 bits (660), Expect = 1e-73
 Identities = 134/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%)

Query: 17  IGSVTIRNRAVLAPMSGVTDLPFRQLAWRYGAGLVVTEMVASRELVANRGESWARLKNAG 76
           IG  T++N  VLAPM+GVTD PFRQL  R GAGLVV+EMV S   + N  +S  R+ + G
Sbjct: 6   IGPYTLQNGLVLAPMAGVTDQPFRQLCKRLGAGLVVSEMVTSDMSLWNTRKSRLRMIHEG 65

Query: 77  -MVPHMVQLAGREAHFMAEAAKIAADNGAGIIDINMGCPAKKVTGGYSGSALMRDPDHAL 135
              P  VQ+AG +A  +AEAA+   + GA IIDINMGCPAKKV    +GSAL++D     
Sbjct: 66  DPEPRSVQIAGGDAQMLAEAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEALVT 125

Query: 136 SLIEATVGAVDVPVTLKMRLGWDENSINAPEIARRAEAAGVQLITIHGRTRMQFYEGRAD 195
            +++A V AVDVPVTLK+R GWD  + N   +A+ AE AG+  + +HGRTR   Y G A+
Sbjct: 126 EILQAVVAAVDVPVTLKIRTGWDRENKNGLVVAKIAEQAGITALAVHGRTRADLYTGDAE 185

Query: 196 WDAIRAVREVISVPLIANGDVETAEDAREILRRSGADAVMVGRGAQGQPWLPAVLAGH-- 253
           +D I A+++ +S+P+ ANGD+++ E AR +L  +GAD +++GR AQG+PW+   +     
Sbjct: 186 YDTIAAIKQAVSIPVFANGDIDSPEKARYVLDATGADGLLIGRAAQGRPWIFREIEHFLR 245

Query: 254 -----SAPQRADIPTIAVEHYEMMLEFYGREAGLRHARKHLGWYL 293
                +APQ +++  I +EH   +  FYG   G+R ARKH+GWYL
Sbjct: 246 TGEKLAAPQLSEVERILLEHLAALHAFYGEVMGVRIARKHVGWYL 290