Pairwise Alignments

Query, 611 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

Subject, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 119/588 (20%), Positives = 225/588 (38%), Gaps = 78/588 (13%)

Query: 36  NERLLHWCRSAPERTWMADRQGREPWRRVSYAEALDKIRRIGQFLLDHDLSVERPLLVLS 95
           NE LL W +  P   ++     R+ +   +YAE  DK  R+   L          + ++S
Sbjct: 20  NEMLLRWAKERPNEVYLKQIINRQ-FVEFTYAEVADKALRLVSALRALGADPGDKVALIS 78

Query: 96  ENSIEHALMVLAAQHVGIASAAITPAYATSADLTKLADIRGQITPGMVFAEDATPFRRAL 155
           +N  E  +  LA       S  I P   +        D   + +   +         +A 
Sbjct: 79  KNCAEWFICDLAMMLGDYISVPIFPTAGSET-----IDYCLEHSESKILIVGKLDDNKAT 133

Query: 156 GEVFDDGTPLVGLR-NLPEDRSNTFHFETLLET-EPTEAVDRAFDAVGPDTVAKFLFTSG 213
             V  +   L+ +    P      + F+TL++  +P+E     FD    + +   ++TSG
Sbjct: 134 AHVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFD----EKLMSIVYTSG 189

Query: 214 TTGSPKAVIQTQRMLCSNQEMIADCYGYFREEPPVVVDWAPWNHTAAGNKVFNLVLYNGG 273
           T+G PK  + T      + + + +  G   EE   +  + P  H      +F   +  G 
Sbjct: 190 TSGQPKGAMLTYGAFTWSAQQLINHIGI--EENDRLFSYLPLAHITERVYIFGSSIIGGV 247

Query: 274 TYYIDRGKPSPAQIGQTLDNLRDISPTWYFNVPAGHEMLVQAM------RKDEALCRSFF 327
                     P  +   +++++   PT + +VP    +  Q +      +K   L +  F
Sbjct: 248 L------TAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPF 301

Query: 328 RD--LKMLMYAGAGMAQHTWDALTELSMATVGHAVL---MGAGL------GSTETAPFS- 375
            +  +K  +  G G+ Q     +     A V  A+L      GL      G TE+  +S 
Sbjct: 302 VNSLIKRKLADGLGLDQ---ARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYST 358

Query: 376 LFCTEPQDKPGNIGIPAQGVTMKLVPFDGRYELRLKGPNITPGYWRNGELTAAAFDEEGF 435
           L      DK G +G    G+ +K+   +   E+ ++   +  GY++N   TA +F+++G+
Sbjct: 359 LNYPFRADKIGTVGNAGPGIELKIAEDE---EILVRSKGLFAGYYKNDTATAESFNDDGW 415

Query: 436 YRIGDTVKFAVADDPRRGFYFDGRMAENFKLQTGTWVAVGPLRAQLVNMFAGLIRDAVIT 495
              GD        D        GR  + FK   G +VA  P+  +L              
Sbjct: 416 LHTGDIGSL----DSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEY----------- 460

Query: 496 GENRAELGALVVPFIPA--LRELVRGSQHLSDAEIIRHPSVRAQIVAKLSAHQKQASGSA 553
             +R E+  L+   +PA  L  +     H   A   R+     +++A++++  +    S 
Sbjct: 461 --SRVEMMCLIGSGLPAPILLAVPHNFPHFDRA---RYERTTQKVIARINSELE----SH 511

Query: 554 SRVMRILVMEDALRFEKGEVTDKGSINQRAVLLHRKELVESLYGDTPQ 601
            ++  +L+++D    + G +T          L  ++ ++E  Y D  Q
Sbjct: 512 EQIKGVLMIKDPWSIDNGILT--------PTLKIKRHVLEKKYHDVGQ 551