Pairwise Alignments

Query, 405 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 421 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  109 bits (273), Expect = 1e-28
 Identities = 102/422 (24%), Positives = 195/422 (46%), Gaps = 26/422 (6%)

Query: 1   MSNIVKSLIAATMATALASWAAPALAKDKIT-FAAAVFAEAGRGDRVKAWIQKFNESQDK 59
           M  I K  +AAT+   LA  A+   A  ++  F +    E G GD   + I+++      
Sbjct: 1   MKTIGKYAVAATVTAMLACTASAVPASAEVLKFVSWQKDEKGIGDWWGSVIKEWEAKHPG 60

Query: 60  VEVEPIAIPFSSLANTVFTQMGGGGGPDLVRFDQTDFFAAIPSGRLLPLDDMISDKDHEF 119
             +E   +  S+ ++T+ T   GG  PD+V     +F     +G L  L   +     + 
Sbjct: 61  NTIEWTKVERSAYSDTMTTLFAGGTPPDIVHLASFEFQTFANNGWLEDLGPWVEKTGLDL 120

Query: 120 LG--PDRFMKVKDVRYGLLFDTTGYALLYNKDILPEP----PKDFESFLAAAKEKTKD-- 171
            G       K +D    ++    G    YN+++L +     P ++E FLAAA+  TKD  
Sbjct: 121 DGWSGQDICKFQDTTVCIMMLYYGTIFGYNEEMLKQAGVDVPTNYEEFLAAARATTKDLN 180

Query: 172 --GV---YGYAYRATMAERAGFWQDLCNYVFGFGGRWSDKDGKLTLNSPDVIKGVTAYKQ 226
             G+   +G  +  T      +  ++ +Y+F  G R++  +G++T+++P++++G+T +K 
Sbjct: 181 GDGIVDQFGTGHE-TKGGGGQYIAEIASYLFDAGARFTSAEGEVTIDTPEMVEGLTRWKT 239

Query: 227 VYDAAVTPRGADAATYRRMFWEGKIAMNVDNGGVAAIFNQNAPQLNFAAAPSPF-PDKAQ 285
           V    +TPR   A   R++F +GKIA+ VD   + +I  Q A +     A  PF P    
Sbjct: 240 VVKENLTPRDLSAGEVRKLFADGKIALKVDGPWIYSIMQQGAAKDKLKLASVPFDPPLGG 299

Query: 286 GLIMTALVVNANTKHKDAAGAFIKWAYSPENQKGLQA-AMGTGVGTKIDMSAEEQAKRPW 344
              + A+    + + K     FI  A S + Q      A  T    + D++ E +A+ P 
Sbjct: 300 SSNILAMPSEISEEKKQLVWDFIAIATSDKFQTSFATLAASTPPSPRADLT-EAKAQIPH 358

Query: 345 LKV----YEGQMQNALPQLVMGHEGKTPEIQQIVLEQVLKVLLENADP----KDAMDRAQ 396
             +     +   ++ + ++ +G E +  E  +++ E+  ++++E+ DP    K   ++A+
Sbjct: 359 FHLMAQSQKAAAEHKIDRIPIGLEIQFNEFSKMIQEEAQRMIIEDLDPAAVAKTMHEKAE 418

Query: 397 SL 398
           +L
Sbjct: 419 AL 420