Pairwise Alignments

Query, 305 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 280 a.a., ABC transporter for D-sorbitol, permease component 1 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (307), Expect = 7e-33
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 23  APVGIYLLLFQFYPLVQQFFMSFTATDLLTPNVNPFVGIENYSFLIEDGELWKVLWITAI 82
           +P    LLL+   PL    + S    +LL P  N FVG+EN+++ + D         T I
Sbjct: 2   SPSVALLLLWMIVPLAMTVYFSVIRYNLLNPGENEFVGLENFAYFVTDSGFLPGALNTLI 61

Query: 83  YTVACVIFAIGTGLGSAMLLD-SPFFGRGIARALITVPWAAPSVAVALVF-TWIFNSQYG 140
              + ++ ++  G+  A LL+ S FFGRGI R L+  P+       +L+F   IF+   G
Sbjct: 62  LVGSVLLISVIFGVLIAALLEASEFFGRGIVRVLLISPFFIMPTVGSLIFKNLIFHPVSG 121

Query: 141 IFNRVLTGLGLPFGGE--NWLDDPNLALPAILLTTVWQIFPFSSVVILAALQGVPHELKE 198
           I    L  +   FG +  +WL   +  L +I++   WQ  PF+ ++++ A+Q +  E KE
Sbjct: 122 I----LAAVWKFFGAQPVDWL--AHYPLFSIIVIVSWQWLPFAILLLMTAMQSLDQEQKE 175

Query: 199 AAVIDGADRLNIFKTATWPTIQPTVLMLTLFVTIWSLRRFDLIWLMTQGGPIGATNTLVI 258
           AA +DGA  L IF   T P +   + ++ +  TI+ L  F  I+  T GGP  A+  L  
Sbjct: 176 AARLDGAGALAIFWHLTLPHLARPIAVVVMIETIFLLSVFAEIFTTTNGGPGFASTNLAY 235

Query: 259 ELYRQGFVYRDLGSAASIGMIGLSIALLVTVIYFKV 294
            +Y Q  V  D+G A++ G+I + IA +  ++  ++
Sbjct: 236 LIYNQALVQFDVGMASAGGLIAVVIANIAAIVLVRM 271