Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 274 a.a., carbohydrate ABC transporter permease from Rhodanobacter denitrificans FW104-10B01

 Score =  142 bits (359), Expect = 6e-39
 Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 2/255 (0%)

Query: 23  AAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTIPVTTWLKNSFLVATGTT 82
           A FP+ WM   S     E  A  P L+P  + LG Y E+F    +  +L NS LVA   T
Sbjct: 22  ALFPLLWMLSVSFMAPGEASALPPPLLPAHATLGNYRELFVRAGMGRYLLNSVLVAGAVT 81

Query: 83  VLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGL 142
            LS++  ++  YA ++ RFAG   L  AL    ++P  + ++PL+ +   + L+N+  G+
Sbjct: 82  ALSLVFNLMAGYAFAKLRFAGRERLFRALLGALVIPAQVAMLPLFLLLKYMGLVNSYAGV 141

Query: 143 VLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVI 202
           V    A V  +  ++++    GIP E+ EAAR+DG     I   I++PL+ P +   A+ 
Sbjct: 142 VAPALASVFGI--FLVRQYARGIPDELLEAARIDGAGEWHIFTRIVLPLLKPIIVTLAIF 199

Query: 203 SFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPIHSVMAVGVIYTLPAIVFYLFA 262
           +F   WN++++    ++ +   T  +GLAS   E +     +MA  V+  LP +  +L  
Sbjct: 200 TFLAAWNDFMWPLIALTGQEHYTLPIGLASLAREHAQDSELMMAGSVVTVLPVLALFLAL 259

Query: 263 QRYVVAGMTAGSVKG 277
           QR+ + G+  GSVKG
Sbjct: 260 QRHYLQGLLLGSVKG 274