Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 283 a.a., sugar ABC transporter permease from Rahnella sp. WP5

 Score =  133 bits (334), Expect = 5e-36
 Identities = 79/274 (28%), Positives = 145/274 (52%), Gaps = 8/274 (2%)

Query: 10  FVRILAVLFMLGFAA----FPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFD-T 64
           F+R+    F+L   A    +P+ W    S+   + L +    ++P+      Y ++F+  
Sbjct: 12  FIRLGLSYFLLLIVAVIIIYPLIWTVGASLNAGNSLLST--SIIPENVSFQHYKDLFNGE 69

Query: 65  IPVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVV 124
           +    W  NS  ++  T +L+++     AY+ SRFRF G           QM+P+   ++
Sbjct: 70  VNYVGWYWNSMKISFLTMILTLICVSFTAYSFSRFRFKGRKDGLMLFLLLQMIPQFSALI 129

Query: 125 PLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRLDIV 184
            ++ +   L L+N+   LVL     ++P+ T+++KG +D IP +++E+AR+DG     I 
Sbjct: 130 AIFVLAQLLGLINSHLALVLIYVGGMIPMNTYLMKGYLDAIPKDLDESARMDGAGNFRIF 189

Query: 185 LGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPIHSV 244
           + II+PL  P LA  A+ SF     +++ + T++ + +  T  +GL + V +     +++
Sbjct: 190 IEIIMPLSKPILAVIALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVAQKMGANYTM 249

Query: 245 MAVG-VIYTLPAIVFYLFAQRYVVAGMTAGSVKG 277
            A G V+  +P  +FYL  Q+Y V+G+TAGS KG
Sbjct: 250 YAAGAVLIAVPVAIFYLALQKYFVSGLTAGSTKG 283