Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 293 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  163 bits (413), Expect = 4e-45
 Identities = 97/273 (35%), Positives = 153/273 (56%), Gaps = 14/273 (5%)

Query: 10  FVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFA----PFPRLVPDWSQLGIYLEVFDTI 65
           ++ +L  LF+L    FP YWM +T+  P +EL +    PF  + P  +     L  FDT 
Sbjct: 28  YIPLLIFLFVL---LFPFYWMVITAFKPDNELLSQSGNPFWVIAPTLAHFKKLL--FDT- 81

Query: 66  PVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVP 125
               WL N+ +V+  +T  S+  +V  AYA+ R RF G   +G  +F   ++P ++L +P
Sbjct: 82  QYPAWLLNTVIVSVVSTFASLAASVFAAYAIERLRFQGSKQVGLGIFLAYLIPPSILFIP 141

Query: 126 LYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRLDIVL 185
           L +I   L L +T   L+L    F++P  TW++ G    IP E+EE A +DG +R +I++
Sbjct: 142 LAAIVFKLGLFDTRWALILTYPTFLIPFCTWLLMGYFRSIPYELEECALIDGATRWEILV 201

Query: 186 GIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPIH--S 243
            II+PL  P L +A + +F   WNE+++A T ISS  ++T  VG+ + + E     H  +
Sbjct: 202 KIILPLAVPGLISAGIFAFTLSWNEFIYALTFISSSEVKTVPVGIVTELVE-GDVYHWGA 260

Query: 244 VMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVK 276
           +MA  ++ +LP  V Y F   Y V+GMT G+VK
Sbjct: 261 LMAGALLGSLPVAVVYSFFVEYYVSGMT-GAVK 292