Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 404 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  148 bits (374), Expect = 2e-40
 Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 13/283 (4%)

Query: 7   NAHFVRILAVLFMLGFA--------AFPIYWMFVTSMTPSSELFA-PFP---RLVPDWSQ 54
           N H      + F+ GF           P Y M +TS+     L   P      L   W  
Sbjct: 123 NRHEFEAAVIRFLTGFGYIFFTAVVLIPFYVMVMTSLKSQQALLQNPLDFSLDLSQGWGL 182

Query: 55  LGIYLEVFDTIPVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFAT 114
              Y E+F      T+L  SF V+  T ++++  ++  AYA++R RFAG A    ++   
Sbjct: 183 FRSYAELFGQFNFGTYLWTSFFVSVLTVLITLAFSIPGAYAVARLRFAGRAAFSRSILLI 242

Query: 115 QMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAAR 174
            M+P  +L +P+Y  F    L NT+ G+VL      +PV  ++++G   G+P E+EEA  
Sbjct: 243 YMVPMIVLALPIYIAFSVTGLRNTLFGIVLIYPVTTIPVALYMLQGYFRGLPAEVEEAGL 302

Query: 175 VDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFV 234
           +DG +RL ++  I +PL  P LA+ ++  F   WNE++ A  L+   +  T + G+AS +
Sbjct: 303 MDGLNRLQVIWKITLPLALPALASVSLYVFMIAWNEFLLAFMLLDDPSKFTLTRGIAS-L 361

Query: 235 GELSTPIHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG 277
                P   +MA  VI T+P +  +L  +R++  G+TAGSVKG
Sbjct: 362 NSSEIPRQHLMAGAVIATVPIMAIFLGLERFMTKGLTAGSVKG 404