Pairwise Alignments

Query, 234 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  130 bits (326), Expect = 3e-35
 Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 6/218 (2%)

Query: 5   LHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLG-NGTIRFCVDSYVEL 63
           + F  VF     I   + +T+ ++  + +L  +IAV + + R++  + T+   + +YVE+
Sbjct: 1   MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEV 60

Query: 64  LRNTPFLVQLFMVFFGLPLVGFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEA 123
            R TP L+QLF +++GLP +G  MS T AA+  ++LN  AY +EIIRA ++S+   Q EA
Sbjct: 61  FRGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEA 120

Query: 124 GLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFISVPELSGAASIIEQR 183
             SL + +++   Y+V+  AF    P L + F  +L  SS+ S +++ EL+    +I  R
Sbjct: 121 AESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTR 180

Query: 184 TFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRRRV 221
           T R FE Y+ + +IYL+L   + I     G W   +++
Sbjct: 181 TSRPFEIYLTIGLIYLILVSIISI-----GSWKIEKKL 213