Pairwise Alignments

Query, 217 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (288), Expect = 1e-30
 Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 7/201 (3%)

Query: 21  VLTAIAFSIGSLTGGF-FAIMRLSQYGSVRNVAAGYITVIQSIPVLMILFMSYYGLTLF- 78
           ++ A+   I SL  G   A+ R S    +R++   YI V + +P++ +LFM+   L LF 
Sbjct: 162 LIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFL 221

Query: 79  --GFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTRFQQYRYVILP 136
             G EI  LL A + + ++ +AY+AE+ RG +QA+PK Q+EA+ +L L+ +++   +ILP
Sbjct: 222 SQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILP 281

Query: 137 QALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVN---NATFRPFQVFFVVALLY 193
           QAL++++P  V   + L K+TS+V ++G  ++   GQ  N   N      + +  VAL++
Sbjct: 282 QALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVF 341

Query: 194 FAICFPLSRLSRHLERVLHVG 214
           +  CF +SR S  LE  LH G
Sbjct: 342 WIFCFGMSRYSIWLEGKLHTG 362