Pairwise Alignments

Query, 219 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 2e-30
 Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 33  LVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIAFFGLG-----LVGIDVPAWL 87
           ++AL L  +R+ +   +   ++ Y+  F+GTPLL+QLF+ ++GL      LVG+D  A+ 
Sbjct: 35  ILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQVFPLLVGLD--AFS 92

Query: 88  AAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVAIPPT 147
           AA + L L  AA++ E  R  +  + + Q EAS S+ M   Q MR +ILPQA RVA+P  
Sbjct: 93  AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSL 152

Query: 148 VGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQI 207
           + +F+ +IK T++   +G  E+     +  +++F+ F  +  VALIY+ +   L++    
Sbjct: 153 MNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSW 212

Query: 208 LERKLNVAH 216
            E+KLN A+
Sbjct: 213 AEQKLNKAY 221