Pairwise Alignments

Query, 223 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 7e-30
 Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 3/207 (1%)

Query: 5   FDFGWLLEYYPQIAKGIAITLELIAIGGVLGIALGIFCAWVRALGPKWLRPPVATYVELI 64
           FDF ++LE  P + K +  TLE+ + G V  + L +F A +R      L P    Y+   
Sbjct: 3   FDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFF 62

Query: 65  RNTPFLIQLFFIFFGLPS---LGLQLSELSAANIAMVVNLGAYSCEIIRAGIQATPKGQF 121
           R TP L+QLF +++GLP    L + L   SAA I + ++  AY  E IRA I    + Q 
Sbjct: 63  RGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQM 122

Query: 122 EAGASLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQ 181
           EA  S+ MT  +  R ++L  + +   P+L +  + ++  +S+   +   ++   A    
Sbjct: 123 EASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEA 182

Query: 182 SRTFRAFEAYMVSTVIYLVLAILLRQL 208
           S +FR FEA++   +IY V+ ++L +L
Sbjct: 183 SSSFRFFEAFLAVALIYWVVVLVLTRL 209