Pairwise Alignments

Query, 288 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (328), Expect = 3e-35
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 8/293 (2%)

Query: 3   LPPLATLRAFESAARKASFALAAQELGMTATAVSQHVRNLEAWLGVALFERHARGVRLTP 62
           LPPL +L+ FE+AAR  SF  AA+EL +T  AVS  ++ LE +LG+ LF R  R + LT 
Sbjct: 5   LPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTE 64

Query: 63  AGMEFGNTVSGSLRQIASGAERIRRGHDRMTVRLASLPSVVAHFLTPRLPRFRASHPDIQ 122
            G  +   +      +A   +++    ++  + ++  PS    +L PRL  F    PDI 
Sbjct: 65  EGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDID 124

Query: 123 VSISYSGAQHTSAAD-----LTIGHGISFGENAVALFSAETRPTCAPSYIASAGPFNDEA 177
           V I        S  D     +  G G   G  A  L+     P C+P+ +    P    +
Sbjct: 125 VRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEKLS 184

Query: 178 SLLRAELLHDDTETAWRDWFAVGDM-SLPYGAGPIFADFNLLVTALKAGQGIGLCPTALL 236
            L    LLHD +   W+ +     + ++    GPIF+   +++ A   GQG+ L    L 
Sbjct: 185 DLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGNNVLA 244

Query: 237 RKEIAEGQLTVLFDRAVDTDKYYWLIRPEEMTASARL--LADWLVAEARGSDL 287
           + EI  G+L   FD  + T+  ++++  E+     R+    DW++ +AR   +
Sbjct: 245 QPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSEQV 297