Pairwise Alignments

Query, 649 a.a., Tetracycline resistance protein, tetM/tetO subfamily from Agrobacterium fabrum C58

Subject, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (329), Expect = 9e-35
 Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 41/455 (9%)

Query: 8   ILAHVDAGKTSLTERLLFDVGVIDKLGSV----DTGNTQTDSLELERQRGITIRAAVVSF 63
           I++H DAGKT++TE++L     I   G+V       + ++D +E+E++RGI++  +V+ F
Sbjct: 18  IISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGISVTTSVMQF 77

Query: 64  TIGDTVVNLIDTPGHPDFIAEVERVLGLLDAAVVVVSAVEGVQAQTRVLVRALQRLAVPF 123
             GD +VNL+DTPGH DF  +  R L  +D+ ++V+ A +GV+ +TR L+   +    P 
Sbjct: 78  PYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLMEVTRLRDTPI 137

Query: 124 LFFINKVDRVGARYDEVVRDLADQLRVRPVVMSKITGAGSKHVQVAATDTECEPLF---- 179
           + F+NK+DR      E++ ++ ++L++    ++   G G +   V     +   L+    
Sbjct: 138 VTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRDETILYTSGQ 197

Query: 180 --TILCETLAENDDELLRDYLLTPDRVDAGR--LSLLLG-------QQTACGVVHPAFAG 228
             TI  E + +  D    D  +  D     R  L L+LG       +    G + P F G
Sbjct: 198 GHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDRELFLQGELTPVFFG 257

Query: 229 VAMTGAGLPALIAAITEMLPARDP---------DPEGEISGKIFKIERGWG---GEKLSY 276
            A+   G+  ++  +T+  P+  P           E + +G +FKI+        +++++
Sbjct: 258 TALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANMDPKHRDRIAF 317

Query: 277 LHLASGT----VRLRHILPLPQGPARLTGIQLFKDGRVQNANSLGAGQIARVTGLAGARV 332
           + + SGT    +++ H+    Q    ++    F  G    A    AG I  +      ++
Sbjct: 318 VRIVSGTYKQGMKMNHVRLGKQ--VNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQI 375

Query: 333 GDSV--GVDAVADGAFHFAPPTLETRVVSRRPSEHAALWLALNQMVEQDPLIGLRRNDET 390
           GD+   G      G  +FA P L  R+  R P +   L   L Q+ E+   + + R  + 
Sbjct: 376 GDTFTQGETLKFTGIPNFA-PELFRRIRLRDPLKQKQLLKGLVQLSEEG-AVQVFRPLQN 433

Query: 391 NEVFVSLYGEVQKQIIQSELSTGFGIEAEFEDSTV 425
           N++ V   G +Q  ++ S L + + +EA +E   V
Sbjct: 434 NDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNV 468