Pairwise Alignments

Query, 419 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

Subject, 522 a.a., N-acetylmuramoyl-L-alanine amidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (493), Expect = 5e-54
 Identities = 105/216 (48%), Positives = 139/216 (64%), Gaps = 1/216 (0%)

Query: 192 VIAVDAGHGGIDAGATGGTTGTEEKVITLTFAKELVERLNREAGIKAFLTRDSDTFLALS 251
           VI +D GHGG D GA G + GT EK++TL  A++L   L      K  LTR+SDT + L 
Sbjct: 294 VIVLDPGHGGKDPGAIGAS-GTYEKIVTLEMARQLKRALEATGRYKVVLTRESDTSVRLR 352

Query: 252 ERVTIARQNNANLFISLHADTLKQKGIRGATVYTLSDRASDRQAQELAERENKSDQIAGV 311
           ER+   R   A+LF+S+HAD +    +RG +VYTLS+ ASD +A +LA+RENK D + G+
Sbjct: 353 ERIAFGRHAGADLFVSIHADAMANPQVRGLSVYTLSETASDDEAAQLADRENKVDILLGM 412

Query: 312 AASTEPPEVADILLDFTRRETQAFSVTLAENIVSSFEGQVGLINNPHRYAGFMVLRAHDV 371
             S E P+VA IL+D  +RET+  SV  A  +VS+  G V  +    RYAGF VL+A DV
Sbjct: 413 DLSQESPDVATILIDLAQRETKNKSVHFANTLVSALPGDVLKLEKTRRYAGFAVLKAPDV 472

Query: 372 PSVLLELGFLSNAEDEKLLLDIEWRKKVADTLATAV 407
           PSVL+E+GFLSN  DEKLL    +R K+A  L  +V
Sbjct: 473 PSVLVEMGFLSNVSDEKLLRTAPYRAKLAAALVRSV 508



 Score = 51.2 bits (121), Expect = 7e-11
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 15/189 (7%)

Query: 23  LASALAFFVATLVSVVPTAHAAEPLVAHQARIIGDEARTRIVLDFAEEPEFDVHYLDSPA 82
           L +   F  A L++  P   A     A   R+      TR VL+ +    + +  L +P 
Sbjct: 26  LLAGTPFVAAALLAPRPALAATR---ATGLRLGDHGGSTRFVLELSGPVTWQLVSLSAPY 82

Query: 83  RIVVDFPAVNFAFPTSDLKPTGLFSDIRFGTMGENSARIVLTAKKPVQVTVAETKKGDDG 142
           R+++D P V FA      + TGL +  R+G +    +R+V+    P  V      +  +G
Sbjct: 83  RLIIDMPEVEFALGLVP-RDTGLVAGARYGVVRPGFSRMVIDLTGPAMVDKDFLLEPREG 141

Query: 143 QSFRFVLDAEITTKGKFAELVKDQQWRAPAPVTTAAITPDDKTSRPAEFVIAVDAGHGGI 202
             +R V+D   TT     E+      +   PV  A +TP+  T        AV       
Sbjct: 142 FGWRLVMDLVPTT----PEIFMAGVGQPAKPVVPATVTPEPSTR-------AVAFAAAAA 190

Query: 203 DAGATGGTT 211
            A A  GTT
Sbjct: 191 PAAAASGTT 199