Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 842 a.a., ribonuclease R (NCBI) from Rhodospirillum rubrum S1H

 Score =  626 bits (1614), Expect = 0.0
 Identities = 354/744 (47%), Positives = 462/744 (62%), Gaps = 12/744 (1%)

Query: 33  HGEVPSREVLLKFIADHPQQASKREIAKAFGLKGENRIVLKALLKELEVDGMVHKSR-KS 91
           H   PSRE +L+FI     +  +REIA+AF + G  R  L+ LLKELE +G + + R + 
Sbjct: 53  HVPFPSREQVLEFIRAANGEVDRREIARAFHITGPERADLRTLLKELESEGALQRGRGRR 112

Query: 92  LTRPGGLPPVTVLDITTRDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAA--G 149
           +  PG LP V VL +   D +G+L  +P  WPED    P +L+        +    A  G
Sbjct: 113 IAPPGSLPEVAVLIVARADAEGDLFCKPEHWPEDE-EPPRILLWPEPHHARRPGVGAEIG 171

Query: 150 LGDRILAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRRG-EEM 208
           +GDRILA++    D     Y AR ++ +    + LLGV      G  RL P +RR  +E 
Sbjct: 172 VGDRILARLTRIGDA---RYDARTIRRLAAAPSRLLGVLALARDGL-RLRPTNRRDRDEY 227

Query: 209 VIDPDGVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPHI 268
           ++ P+  G A+ G+L+E E    S R GL RAKV+  +G     ++IS++ +++H IP  
Sbjct: 228 LVAPEDAGGAEPGELVEAELLP-SRRLGLRRAKVIERLGGREGPRSISLVVVHSHDIPVD 286

Query: 269 FPPNVLAEADAAKAATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVIVT 328
           FPP  LAEA+AA    +  RED R +PL+TID  DA+D DDAV+AE D  P NP G    
Sbjct: 287 FPPEALAEAEAAVGVDLRGREDLRAVPLVTIDGEDARDFDDAVFAEPDDDPANPGGWRAL 346

Query: 329 VAIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVR 388
           VAIADV+ YVR GA LD+ A +RGNSVYFPDRVVPMLPE +SN  CSL+   DR  LAV 
Sbjct: 347 VAIADVAHYVRIGAALDKAARERGNSVYFPDRVVPMLPEALSNGWCSLRPNEDRGCLAVW 406

Query: 389 MTFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGNPDDKTGTLLEPILKPLWHAYEVM 448
           M F  EG K  H F R +M+SAA+L+Y Q QAA DG+ DD T  L E ++ PL+  ++ +
Sbjct: 407 MIFDAEGNKLRHRFLRGLMRSAARLTYTQVQAARDGHADDLTAPLQERVIAPLYGVFQAL 466

Query: 449 KRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETLETK 508
              R RR  LELD+PERK+ L   G V ++    R D+HKLIEE+MI ANV+AAETLE K
Sbjct: 467 LGARSRRGTLELDLPERKVVLDDGGEVARIEPRLRFDSHKLIEELMIAANVSAAETLEEK 526

Query: 509 KQRLVYRVHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIMVNE 568
           ++  +YRVHD P   K   L EFL ++ I   KG   R+  FNG+L  A  TPH+ MVNE
Sbjct: 527 RRPCMYRVHDQPAPDKLVALGEFLESLDIPFHKGSINRSGQFNGVLKAARGTPHEHMVNE 586

Query: 569 MVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGLGEGGITPQE 628
           +VLRSQ+QA YSP+NIGHFGL L +YAHFTSPIRRYADL+VHRAL+  LGLG+ G+ P  
Sbjct: 587 VVLRSQAQAEYSPDNIGHFGLALRRYAHFTSPIRRYADLLVHRALIAGLGLGDDGLRPGA 646

Query: 629 EATLDDIAAEISTFERRAMAAERDTVNRLIAHHLSERVGEEFEGRVGGVTKAGLFVALPQ 688
           E    + AA I+  ERRA  AERD VNR     L+ +VG  F GR+ GVT+AGLFV L  
Sbjct: 647 EEDFVETAAHITATERRAAQAERDAVNRYTVSFLAAKVGATFAGRINGVTRAGLFVTLED 706

Query: 689 FGADGFVPISTLGTDYFFYDEAHQALTGEKTGLGYQLGDTVQVRLAEAVPLAGALRFEML 748
            GADG +PI +L  DY+ +D+AH  L G++ GL + LG  V+V L EA P++G L F +L
Sbjct: 707 TGADGLIPIGSLPNDYYVHDDAHHCLRGQRDGLEFHLGAPVEVLLREANPVSGGLVFGLL 766

Query: 749 SPGRKMPVGSRSFHKAGRRTSRPG 772
             G       R F  +G+   R G
Sbjct: 767 QGGVAGAAKGRGF--SGKTKGRDG 788