Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 710 a.a., ribonuclease R from Pedobacter sp. GW460-11-11-14-LB5

 Score =  269 bits (687), Expect = 4e-76
 Identities = 192/594 (32%), Positives = 295/594 (49%), Gaps = 27/594 (4%)

Query: 151 GDRILAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRRGEEMVI 210
           GD + A +F  K   G      VV++I R ++   GV K ++     +    +   ++ +
Sbjct: 116 GDTVKAYVFAKKS--GRKNDGEVVEIIKRAKSDFTGVIKISDRFAFVIADDKKMMHDIFV 173

Query: 211 DPDGVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYA-HGIPHIF 269
                 +AK+G  + V  S            V  V+G+   E    M AI A +G P  F
Sbjct: 174 PLADTHEAKNGQRVLVTLSDWPESAKNPIGIVKHVLGN-QGENNTEMNAILAQYGFPLEF 232

Query: 270 PPNVLAEADAAK----AATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGV 325
           PP V  EA+A      AA ++ R+D+R++   TIDPADAKD DDA+  +  P+ ++  GV
Sbjct: 233 PPQVEREANAIPEEIPAAEIAKRKDFRNVLTFTIDPADAKDFDDAISYQKLPNGNHEIGV 292

Query: 326 IVTVAIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPAL 385
                IADVS YV  G  LD+EA  R  SVY  DRV+PMLPER+SN +CSL+   D+   
Sbjct: 293 ----HIADVSHYVIQGTELDKEAYSRATSVYLVDRVIPMLPERLSNGVCSLRPHEDKLCF 348

Query: 386 AVRMTFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGNPDDKTGTLLEPILKPLWHAY 445
           A      ++    S  + R ++ S  + SY++AQ  I    ++K G   + ILK    AY
Sbjct: 349 AAVFELDEQANIQSEWYGRTVIHSDRRFSYEEAQEVI----ENKEGDYAKEILKLNELAY 404

Query: 446 EVMKRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETL 505
            +++  + +   +  +  E K +L   G    V + ER DAHKLIE+ M+ AN   AE +
Sbjct: 405 -ILRDRKFKNGAISFESTEVKFKLDEAGKPIGVYVKERKDAHKLIEDYMLLANRKVAEFI 463

Query: 506 ETK-----KQRLVYRVHDAPTLSKQEVLREFLGTIGISM-AKGVAMRANSFNGILARALD 559
             K     K   VYRVHD+P +        F    G  +  K     A S N ++     
Sbjct: 464 AKKTKGKDKLTFVYRVHDSPNMETLNTFATFASRFGYKINTKSDKEIAKSLNNLMNDVEG 523

Query: 560 TPHQIMVNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGL 619
              Q ++  + +RS ++AIYS +   H+GL    Y HFTSPIRRY D++ HR L   L  
Sbjct: 524 KKEQNILTSLAIRSMAKAIYSTKKTSHYGLAFEYYTHFTSPIRRYPDVMAHRLLQTYL-- 581

Query: 620 GEGGITPQEEATLDDIAAEISTFERRAMAAERDTVNRLIAHHLSERVGEEFEGRVGGVTK 679
            +GG +   E   +      S  E+RA  AER ++    A +L   +G  ++G + GVT+
Sbjct: 582 -DGGKSADME-FYEVACVHSSAMEKRAADAERASIKYKQAEYLENNIGTAYKGIISGVTE 639

Query: 680 AGLFVALPQFGADGFVPISTLGTDYFFYDEAHQALTGEKTGLGYQLGDTVQVRL 733
            G++V + +   +G + +  +  D++  DE +  + G++    YQLGD V +R+
Sbjct: 640 WGMYVEIEENKCEGMIRLRDISDDFYVLDEKNYCIVGQRKKKKYQLGDEVMIRV 693