Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 751 a.a., ribonuclease R (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  665 bits (1716), Expect = 0.0
 Identities = 365/737 (49%), Positives = 477/737 (64%), Gaps = 16/737 (2%)

Query: 37  PSREVLLKFIADHPQQASKREIAKAFGLKGENRIVLKALLKELEVDGMVHKSRKSLTRPG 96
           P+++ +L +I D+P +A+KREIA+AFG+KG  RI LK LLKELE  G + K ++S   P 
Sbjct: 5   PTKDEVLAWIEDNPARANKREIARAFGIKGAARIDLKRLLKELEGKGHLEKRKRSYRDPE 64

Query: 97  GLPPVTVLDITTRDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAAGLGDRILA 156
            LPPV+VL +   D DG+L  RP +W +  GA PA LI     D     PA   GDRILA
Sbjct: 65  SLPPVSVLKVGDADGDGDLFARPLDW-QGAGAEPACLIIPRKGD-----PALAEGDRILA 118

Query: 157 KIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRRGE-EMVIDPDGV 215
           ++    +    AY AR+++ I      +LG+ ++T   GGR++PID+  + E  +   G+
Sbjct: 119 RL-TRVEGEDYAYEARLIRRIGTGPRKILGILRKT-AEGGRIVPIDKGADREWRVAQGGL 176

Query: 216 GDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPHIFPPNVLA 275
             A+DGDL+E E +   GR GL  A+V  V+G     K++S+IAI+ HGI   FP   LA
Sbjct: 177 LGAQDGDLVEAEQAGPKGRMGLPLARVTQVLGDPGGAKSVSLIAIHQHGILDEFPEAALA 236

Query: 276 EADAAKAATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVIVTVAIADVS 335
           EA+A  A  +  R D RDLPLITIDP DA+D DDAV A  D  P NP G ++ VAIADV+
Sbjct: 237 EAEAVTAPELGARTDLRDLPLITIDPPDARDRDDAVCAIPDDDPANPGGFVLWVAIADVA 296

Query: 336 WYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMTFSKEG 395
             VRPG  LDREA KRGNS YFPDRVVPMLP+ +S DLCSL E VDR  +AVRM    EG
Sbjct: 297 AAVRPGGALDREARKRGNSTYFPDRVVPMLPDSLSGDLCSLHEDVDRACMAVRMVIDAEG 356

Query: 396 RKASHTFHRIMMKSAAKLSYQQAQAAIDGNPDDKTGTLLEPILKPLWHAYEVMKRGRDRR 455
            K   TFHR +M+S A L+Y + QAA+DG+P ++T  LLEPIL+PL+ AYE +K  R RR
Sbjct: 357 TKRGQTFHRGLMRSRASLAYGEVQAAVDGDPTERTEPLLEPILRPLFAAYEALKAARARR 416

Query: 456 QPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETLETKKQRLVYR 515
           QPL+LD+PER+I L   G V  V   +RL+ H+LIEE M+ ANVAAAETL  K+  L+YR
Sbjct: 417 QPLDLDLPERRIALSETGEVTSVAFRDRLEVHRLIEEFMVLANVAAAETLAKKRTPLLYR 476

Query: 516 VHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIMVNEMVLRSQS 575
           VH+ P  +K + LRE +   G+++AKG  +R    N +LA+A  T    ++N   LRS +
Sbjct: 477 VHEEPAETKLDALRETVQAAGLTLAKGRVLRTADLNRLLAQAAGTDDAELINISTLRSMT 536

Query: 576 QAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGLGEGGITPQEEATLDDI 635
           QA YSPEN GHFGL L  YAHFTSPIRRYADLIVHRAL+ + G GE G++  +   LD+ 
Sbjct: 537 QAYYSPENFGHFGLALQNYAHFTSPIRRYADLIVHRALITAHGFGEDGLSEADIERLDET 596

Query: 636 AAEISTFERRAMAAERDTVNRLIAHHLSERVGEEFEGRVGGVTKAGLFVALPQFGADGFV 695
              IS  ERR+MAAERDT++R +A +L++RVG EF  R+ GV + G F  L + GADG +
Sbjct: 597 GKLISEAERRSMAAERDTIDRYLAAYLADRVGNEFSARISGVARFGAFARLDETGADGLI 656

Query: 696 PISTLGTDYFFYDEAHQALTGEKTGLGYQLGDTVQVRLAEAVPLAGALRFEMLS-PGRKM 754
           PI T+G ++F +D   QAL G  TG    +G  V VRLAEAVP+ G +  E+L+     +
Sbjct: 657 PIRTIGAEFFHFDADAQALVGSDTGFRLAMGQRVTVRLAEAVPVTGGIGLELLAVEDETV 716

Query: 755 PVGSRSFHKAGRRTSRP 771
           P G R      R  SRP
Sbjct: 717 PTGRR------RGKSRP 727