Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 864 a.a., ribonuclease R from Ralstonia sp. UNC404CL21Col

 Score =  378 bits (971), Expect = e-109
 Identities = 265/791 (33%), Positives = 389/791 (49%), Gaps = 60/791 (7%)

Query: 36  VPSREVLLKFIADHPQQASKREIAKAFGLKGENRIVLKALLKELEVDGMVHKSRKSLTRP 95
           +PSRE +L  +       S  +IAKA  +  +        L  +E DG +  +RK     
Sbjct: 8   IPSREEILGVLRTSGSPLSATDIAKALSVTRKEHDGFIKRLTAMERDGQIELNRKGRYEL 67

Query: 96  GGLPP-VTVLDITTRDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAAGLGDRI 154
              P  +    I  RD  G  +    E        P + + +    +         GDR 
Sbjct: 68  AHQPNFIEGRVIGHRDGFGFFVRDDGE--------PDIFLPEREMQKAMH------GDRA 113

Query: 155 LAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRR-GEEMVIDPD 213
           L +     D  G +   ++V+++ R    ++G    +E G   + P D+R G +++I P 
Sbjct: 114 LVRAV-GYDRRGRS-EGQIVEILQRANKRVIGRLL-SESGTLVVAPEDKRLGRDILIAPK 170

Query: 214 GVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPHIFPPNV 273
           G G AK G ++ VE      RY     +V+ V+G +        IA+  +G+PH F    
Sbjct: 171 GQGKAKVGQVVSVEILEYPDRYVQPIGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFSEPT 230

Query: 274 LAEADA----AKAATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVIVTV 329
             EA+A     + A ++ R D RD+PL+TID  DA+D DDAVYAE         G  + V
Sbjct: 231 QREAEALPDVVRDADLAGRIDLRDVPLVTIDGEDARDFDDAVYAE-PVKIGRSKGWRLIV 289

Query: 330 AIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRM 389
           AIADVS YVRPG PLD +A+ R  SVYFP RV+PMLPE++SN LCSL   VDR  +    
Sbjct: 290 AIADVSHYVRPGHPLDADAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDA 349

Query: 390 TFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDG--NPDDKTGTLLEPILKPLWHAYEV 447
             + +G   ++ F+  +M S A+L+Y +  A +     P+      L P L+ L+  Y+ 
Sbjct: 350 VITAKGEIKAYQFYPAVMHSKARLTYNEVWAILSNVKGPEAAKRAPLVPHLQELYELYQT 409

Query: 448 MKRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETLET 507
           + + R  R  ++ D  E  I     G +++++   R DAH+LIEE M+ ANV AAE LE 
Sbjct: 410 LLKARRERGAIDFDTTETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAEMLEK 469

Query: 508 KKQRLVYRVHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIMVN 567
            K   +YRVH  PT  K + LR FL T G+++  G   +A  +  ++ +    P   M+ 
Sbjct: 470 YKHPALYRVHAGPTEEKLQALRAFLKTSGLTLGGGDKPQAADYAELMEKVAARPDAPMLQ 529

Query: 568 EMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRAL---------VGSLG 618
            M+LRS  QA+YSP+NIGHFGL    YAHFTSPIRRY DL+VHR++         V +L 
Sbjct: 530 TMLLRSMQQAVYSPDNIGHFGLAYPAYAHFTSPIRRYPDLLVHRSIKAILNRTRYVPALA 589

Query: 619 LG---EGGITPQE---------------------EATLDDIAAEISTFERRAMAAERDTV 654
            G      ++P+                      EA   ++    S  ERRA  A RD  
Sbjct: 590 PGVQLNSALSPKARRLQAEAEKGVPAAVVNKAKVEAIWHELGVHCSANERRADEASRDVE 649

Query: 655 NRLIAHHLSERVGEEFEGRVGGVTKAGLFVALPQFGADGFVPISTLGTDYFFYDEAHQAL 714
             L  + + +++G EF G V  VT  G+FV L +   +G V ++ LG+DYF YDEA   L
Sbjct: 650 AWLKCYFMRDKLGNEFSGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQYDEARNEL 709

Query: 715 TGEKTGLGYQLGDTVQVRLAEAVPLAGALRFEML-SPGRKMPVGSRSFHKAGRRTSRPGA 773
            GE+TG+ Y+L D V+V+L      A  + F ++  P  K    ++         +R  A
Sbjct: 710 RGERTGIRYRLTDRVRVQLLRVDLDARKMDFRLIQEPSTKALRPAKVTGAPEAAAARQAA 769

Query: 774 KPGTRPPRGRR 784
                PP GR+
Sbjct: 770 VATPAPPVGRK 780