Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

 Score =  370 bits (950), Expect = e-106
 Identities = 263/801 (32%), Positives = 387/801 (48%), Gaps = 77/801 (9%)

Query: 36  VPSREVLLKFIADHPQQASKREIAKAFGLKGENRIVLKALLKELEVDGMVHKSRKSL--- 92
           +PSRE +L  +       +  +IA+A  +K + R      L  +E DG +   +++L   
Sbjct: 18  IPSREEILGVLRTSEAPLAANDIAEALSIKRQEREGFFKRLGAMERDGQIRLDQRNLYQL 77

Query: 93  TRPGGLPPVTVLDITTRDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAAGL-- 150
           T P                   + GR     +  G     LIR   QD     P A +  
Sbjct: 78  THPSNF----------------VAGRVQGHRDGYG----FLIRDDGQD-DLFLPTAEMQK 116

Query: 151 ---GDRILAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRRGEE 207
               DR+LA+I        P     +V++ DR    ++G     E G   + P D+R   
Sbjct: 117 VMHNDRVLARIVGYDRRGRPE--GHIVEVTDRANKRVIGRLLN-ENGALIVAPEDKRIGH 173

Query: 208 MVIDPDGVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPH 267
            ++       AK G ++ VE +    R+     +V+ V+G +        IA+  +G+PH
Sbjct: 174 DILIQQNTKKAKVGQVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPH 233

Query: 268 IFPPNVLAEA----DAAKAATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPD 323
            F    L EA    D  +     HR D RD+PL+TID  DA+D DDAVY E        +
Sbjct: 234 EFSQAALDEASRLPDEVRPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCE-PVQVGRGE 292

Query: 324 GVIVTVAIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRP 383
           G  + VAIADVS YV P + LD +A++R  SVYFP RV+PMLPE++SN LCSL   VDR 
Sbjct: 293 GFRLIVAIADVSHYVHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRC 352

Query: 384 ALAVRMTFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGN--PDDKTGTLLEPILKPL 441
            L   M  +  G   ++ F+  +M SAA+L+Y +  A +     P+      L P L+ L
Sbjct: 353 VLVCDMIITARGEVKAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEATRRAALLPQLQNL 412

Query: 442 WHAYEVMKRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAA 501
           +  Y+ +   R +R  ++ D  E  I     G +++++   R DAHKLIEE M+ ANV A
Sbjct: 413 YGVYKSLFAARQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCA 472

Query: 502 AETLETKKQRLVYRVHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTP 561
           A+ L+  K   ++RVH  PT  K E LR FL  +G+++A G    A+ +  ++A+  + P
Sbjct: 473 ADFLKRNKHPGLFRVHAGPTAEKLENLRTFLRGMGLTLAGGDKPHASDYAALMAQIRERP 532

Query: 562 HQIMVNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSL---- 617
              M+  M+LRS  QA+YSP+NIGHFGL    YAHFTSPIRRY DL+ HRA+   L    
Sbjct: 533 DAQMLQTMLLRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRK 592

Query: 618 --------------------------GLGEGGITPQEEATLDDIAAEISTFERRAMAAER 651
                                         G +     A  +++    S  ERRA  A R
Sbjct: 593 YQPEPPQGVELNTALSPRARAMQQADDEKRGRVRGNNVAIWEELGLHCSANERRADEASR 652

Query: 652 DTVNRLIAHHLSERVGEEFEGRVGGVTKAGLFVALPQFGADGFVPISTLGTDYFFYDEAH 711
           D    L  + + +++GEE+ G V GVT  G+FV L     +G V ++ LG+DYF YDE  
Sbjct: 653 DVEAWLKCYFMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIK 712

Query: 712 QALTGEKTGLGYQLGDTVQVRLAEAVPLAGALRFEML------SPGRKMPVGSRSFHKAG 765
             L GE+TG+ Y+L D V+V+++     A  + F ++       P  + P   +S  + G
Sbjct: 713 NELRGERTGIRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVRGPSADKSSGENG 772

Query: 766 --RRTSRPGAKPGTRPPRGRR 784
             R  + P A+ G   P  RR
Sbjct: 773 GARVRALPPAEGGAPAPGARR 793