Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 366 a.a., DNA polymerase IV from Pedobacter sp. GW460-11-11-14-LB5

 Score =  246 bits (629), Expect = 6e-70
 Identities = 140/348 (40%), Positives = 213/348 (61%), Gaps = 4/348 (1%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGG--GKRGVVSTACYIARIHGVRSAMPMFKAL 80
           I HID DAFYASVE+RD PE   KP++VGG    RGVVSTA Y AR +G+RSAM   KA 
Sbjct: 12  IIHIDMDAFYASVEQRDFPEYRGKPLVVGGKPDSRGVVSTASYEARQYGIRSAMSSSKAY 71

Query: 81  EACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140
           + CP A+ + P  + Y+ V + +R +    T L++PLS+DEA+LD++  +KL       +
Sbjct: 72  QLCPTAIFVYPRFDAYTAVSKALREIFSRYTDLIEPLSLDEAYLDVT-EDKLGIGSAIDI 130

Query: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIW 200
                  ++ E+ ++ SAG+S  KF+AKVASD+ KP G + +G ++  +F+   PV   +
Sbjct: 131 AQSIKDAIKNELNLTASAGVSINKFVAKVASDMNKPDGLTFIGPSKIKAFMEKLPVEKFF 190

Query: 201 GVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKS 260
           GVGK   A ++A  I   A L+++ E++L+ ++G  G+  +++ RGIDER V ++   KS
Sbjct: 191 GVGKVTGAKMKAMQINTGADLKKLTEAQLVAQFGKSGRFYYKIVRGIDERPVQSHRETKS 250

Query: 261 VSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRL 320
           V +E TF  D +    +  +L+ +SE VA RL+K  ++G+TV LK+K ADFK  TR+R  
Sbjct: 251 VGAEDTFPEDTNEDSVMHDLLKQISETVAKRLEKYQLSGKTVTLKIKFADFKLITRSRSF 310

Query: 321 DDPTQLADRIFRTGLALLEKETDG-TKFRLIGIGVSDLRDAGLADPPD 367
             P   A+ I+   + LLE+   G T+ RL+GI +S   D    + P+
Sbjct: 311 AAPINKAEVIYAEAIKLLEEAALGTTQVRLLGITLSRFYDDVEIEKPE 358