Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 439 a.a., DNA polymerase IV from Pedobacter sp. GW460-11-11-14-LB5

 Score =  159 bits (402), Expect = 2e-43
 Identities = 116/379 (30%), Positives = 191/379 (50%), Gaps = 16/379 (4%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGG-KRGVVSTACYIARIHGVRSAMPMFKALE 81
           I H+D DAF+ SVE R NP+L+ KPVI+GGG  RGVV++  Y AR +G+ SAMP   A  
Sbjct: 7   IIHMDQDAFFVSVEIRKNPKLSGKPVIIGGGGDRGVVASCSYEARQYGIHSAMPGRTAKL 66

Query: 82  ACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARVL 141
            CP A+ +K DME+YS+   EI  ++ +  PL +  SIDE ++D++G ++       +  
Sbjct: 67  LCPQAIFLKGDMEEYSKASHEITEVIADKVPLFEKASIDEHYIDMTGMDRFF--GCMKFA 124

Query: 142 AKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIWG 201
           ++    + +E+G+ +S GLS  K +AK+A++  KP G   V   +   FL    +  I G
Sbjct: 125 SELRQTIIREMGLPISFGLSINKTVAKIATNESKPSGEMQVTFPQLRPFLDPLAIHKIPG 184

Query: 202 VGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKSV 261
           +G A    L   G+R I  L ++ +  + +  G  G  L++ A GID   V      KS+
Sbjct: 185 IGHATYKKLSEMGVREILTLTQIPQQLMFKILGQHGLSLWQKANGIDLSPVVPYRERKSI 244

Query: 262 SSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRLD 321
            ++ TF  D      L  I+  +   + ++L+        + + ++  +F++ T+  R+ 
Sbjct: 245 GTQATFESDTMDMAKLKAIITGMVTGLTFQLRNQKKLTACITVTVRYTNFETVTQQERI- 303

Query: 322 DPTQLADRIFRTGLALLEK-ETDGTKFRLIGIGVSDL----RDAGLADPPDLVDRQATRR 376
             T L   +     +L EK        RL+G+ +S L       GL +        A   
Sbjct: 304 PYTSLDSFLISKAHSLFEKVYAKRMLLRLVGVKLSHLVSGYEQIGLYN-------VAEEE 356

Query: 377 AAAEAAMDKLRDKFGKGSV 395
            +   AMDK+R+ +G  +V
Sbjct: 357 YSLYQAMDKVRNHYGAEAV 375