Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 481 a.a., DNA-directed DNA polymerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  231 bits (590), Expect = 3e-65
 Identities = 136/338 (40%), Positives = 187/338 (55%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGGKRGVVSTACYIARIHGVRSAMPMFKALEA 82
           I HID DAF+ASVE+ D+P L  KPV VGG  RGVVS A Y AR  GVRSA+PM  AL  
Sbjct: 6   IMHIDMDAFFASVEQMDDPSLRGKPVAVGGSHRGVVSAASYEARRFGVRSALPMSTALRL 65

Query: 83  CPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARVLA 142
           CP  +V+   M +Y+ +   I   ++E +PLV+P S+DEA+LD +G E+L        +A
Sbjct: 66  CPHLIVVPGRMRRYAEISHRIMDALREFSPLVEPASVDEAYLDATGLERLFGPVENMGMA 125

Query: 143 KFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIWGV 202
                ++   G++ S G +  KFLAK+ASD+ KP G  ++   +   FL   PV  I GV
Sbjct: 126 VKARVLDVTGGLTCSVGAAPVKFLAKIASDVNKPNGLFILYPEDVAEFLRTLPVGRIPGV 185

Query: 203 GKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKSVS 262
           GK     LE  G+R    +         RR+G  G  L   A G+D R V      KS S
Sbjct: 186 GKRSLDALEQLGVRFAGDVLRYSREFWERRFGKGGVHLHERASGVDPREVEPYSEPKSES 245

Query: 263 SETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRLDD 322
           +E TF  D +    L   L + +E+V   L++  +AG+T+ LK+K ADF+S +R+  L +
Sbjct: 246 AENTFSEDTADRAVLRRWLLAQAERVGASLRRQRLAGRTITLKVKYADFRSISRSHSLPE 305

Query: 323 PTQLADRIFRTGLALLEKETDGTKFRLIGIGVSDLRDA 360
           PT   + IF     LL+  T   K RLIG+GVS+   A
Sbjct: 306 PTASTETIFDEACRLLDALTLADKVRLIGVGVSNFGPA 343