Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 385 a.a., DNA-directed DNA polymerase from Burkholderia phytofirmans PsJN

 Score =  172 bits (435), Expect = 2e-47
 Identities = 122/361 (33%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGGK----------------------RGVVST 60
           IAH+D DAFYASVE    PEL  KPV++GGG+                      RGVV+T
Sbjct: 8   IAHLDMDAFYASVELLRYPELRGKPVVIGGGRNATPKILADGTRRFARLRDYVGRGVVTT 67

Query: 61  ACYIARIHGVRSAMPMFKALEACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSID 120
           + Y AR  GV SAM M KA +  PDA+++  D E Y R  R  +  +   T  ++   ID
Sbjct: 68  STYEARAFGVFSAMGMMKAAQLAPDAILLPTDFESYRRYSRLFKDAVGAFTDQMEDRGID 127

Query: 121 EAFLDLSGTEKLHHDPPARVLAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFS 180
           E ++DL+       +   R+ A     V +   ++ S  ++  K LAK+ S+L KP G +
Sbjct: 128 EIYIDLTAVTGESRELGDRIKA----AVRQATSLTCSIAIAPNKLLAKIGSELDKPDGLT 183

Query: 181 VVGEAEALSFLAARPVTTIWGVGKAFAATLEADGIRMIAQLQEMEESELMRRYG-VMGQR 239
           V+  A+  S +       I G+G      L   GI  + +L   +   L   +G    + 
Sbjct: 184 VLTMADLESRIWPLAAKKINGIGPRATERLAGIGIATVGELAAADPGLLQEHFGRTYAEW 243

Query: 240 LFRLARGIDERHVHNNDPVKSVSSETTFFHDISRHED---LVPILRSLSEKVAWRLKKSG 296
             R+ARGID+R +      KS+S ETTF  D+  + D   L P L  L E+VA  L++ G
Sbjct: 244 FARVARGIDDRPIVVASEPKSMSRETTFERDMHVNRDRVTLTPALTRLCERVADDLQRKG 303

Query: 297 IAGQTVVLKMKTADFKSRTRNRRLDDPTQLADRIFRTGLALLEKETDGTKFRLIGIGVSD 356
             G+TV LK+K ADF+  TR+  L +    A  I R     L++     + RLIG+ +  
Sbjct: 304 YGGRTVGLKIKFADFRIVTRDLSLPEAVTDAAAIRRAAGECLKRVPLDRRIRLIGVRIGS 363

Query: 357 L 357
           L
Sbjct: 364 L 364