Pairwise Alignments

Query, 503 a.a., NADH dehydrogenase I chain M from Agrobacterium fabrum C58

Subject, 534 a.a., NAD(P)H-quinone oxidoreductase subunit D from Synechococcus elongatus PCC 7942

 Score =  292 bits (747), Expect = 2e-83
 Identities = 168/490 (34%), Positives = 268/490 (54%), Gaps = 18/490 (3%)

Query: 4   WPILSTVTFLPLVGVVLLLLTNENGPYGRRNILNVSLLTTVFTFIVSLFV-WIGFDNSNP 62
           +P L+T+  LP+V  + + L  +    G   I   SL+  +  FI+ +   W  +D SNP
Sbjct: 6   FPWLTTIILLPIVAALFIPLLPDRDGKGT-TIRWYSLIVGLVDFILLVVAFWTSYDFSNP 64

Query: 63  GFQMVEKHAWFGKIAA-YHLGVDGISMLFVILTTFLMPFCVLASWNSIEKRVKEYMIAFL 121
             Q+VE +AW  +I   + +G DG+SM  ++LT F+    +LA+W  +  + + +    L
Sbjct: 65  DLQLVESYAWVPQIGLNWSVGADGLSMPLILLTGFISTLAMLAAW-PVTFKTRFFYFLML 123

Query: 122 LLEVVMVGVFVALDTVLFYVFFEATLIPMFIIIGVWGGKDRVYASYKFFLYTLLGSVLTM 181
            +    + VF   D ++F+  +E  LIP+++++ +WGGK R YA+ KF LYT   S+  +
Sbjct: 124 AMYGGQILVFAVQDLLVFFFAWELELIPVYLLLAIWGGKRRQYAATKFILYTAGSSLFIL 183

Query: 182 LAIMAMYWQSGTT--DMTELLKYGFPAGMQTWLWLACFAAFSVKMPMWPVHTWLPDAHVQ 239
           +A +AM +       D   L    +  G Q  L+     A+ VK+P+ P+HTWLPDAH +
Sbjct: 184 VASLAMAFSGDVISFDFQTLAAKEYAIGFQLLLYAGFLIAYGVKLPIVPLHTWLPDAHGE 243

Query: 240 APTAGSVILAGVMLKLGGYGFIRFSLSMFPLASDYFAPFVFTLSVLAIIYTSLVAMMQDD 299
           A     ++LAG++LK+GGY   R +  M P A   FAP +  L V+ I+Y +L +  Q +
Sbjct: 244 ATAPVHMLLAGILLKMGGYALFRMNAGMLPEAHARFAPILVLLGVVNILYAALTSFAQRN 303

Query: 300 IKKLIAYSSVAHMGYVTMGIFAANVQGVQGAIFQMLSHGIVSGALFLCVGVVYDRLHTRE 359
           +K+ IAYSS++HMG+V +G+ +    G+ G++ QM+SHG++  +LF  VG  YDR HT  
Sbjct: 304 LKRKIAYSSISHMGFVLIGLGSFTQLGLSGSMLQMVSHGLIGASLFFLVGATYDRTHTLM 363

Query: 360 ISAYGGLVNNMPKYAVAFMIFTMANVGLPGTSGFVGEFLTLIGVFRAN-------TLVAL 412
           +   GG+   M K    +    MA++ LPG SGFV E +  +G   ++        +V  
Sbjct: 364 LDEMGGVGQKMRKMFAMWTTCAMASLALPGMSGFVAELMVFVGFATSDAYGLPFKVVVIS 423

Query: 413 FAATGVILSAAYALWLYRRVIFGALEK--ESLKSMLDLSTREKVILYPLVALTIFFGVYP 470
            AA GVIL+  Y L + R + FG   K     ++++D   RE  I+  L+   I  G+YP
Sbjct: 424 LAAIGVILTPIYLLSMLREIFFGPENKTLTEHETLVDAEPREVYIIACLLVPIIGIGLYP 483

Query: 471 ---APVFDAT 477
                V+DAT
Sbjct: 484 KLTTQVYDAT 493