Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 337 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  405 bits (1041), Expect = e-118
 Identities = 199/338 (58%), Positives = 255/338 (75%), Gaps = 12/338 (3%)

Query: 1   MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQ 60
           M  F+  Y+WPA+I+V Q L +++ +L AIA+L  A+RKV  A+Q+R+GPNVVGPFGL Q
Sbjct: 1   MADFWGGYLWPAIIIVLQCLAIILPMLGAIAYLTYAERKVIGAMQMRKGPNVVGPFGLLQ 60

Query: 61  SFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYI 120
             AD +K  LKE +IP GAN+AVF++APL+   LAL  +AVIPF  GWVVA+INVG+LY+
Sbjct: 61  PLADGVKLFLKETIIPTGANRAVFIIAPLMTFILALIAWAVIPFDAGWVVADINVGVLYL 120

Query: 121 FAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDI 180
           FA+S L VYGIIM GWASNSKY FLG LRSAAQMVSYEV++GL+I+ V+L  GS+NL+DI
Sbjct: 121 FAVSGLGVYGIIMAGWASNSKYAFLGGLRSAAQMVSYEVAMGLIIIAVILSAGSMNLSDI 180

Query: 181 VLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM 240
           V AQR G+            W+++  FPMF++F +S LAETNR PFDLPEAE+ELV+G+ 
Sbjct: 181 VEAQRQGV------------WYFIPHFPMFVMFLVSILAETNRAPFDLPEAEAELVSGYN 228

Query: 241 VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVF 300
           VEY + P+ +F LGEY  ++L+  +T ILFLGGWLP VD+   NW+PGI+WF LK  ++ 
Sbjct: 229 VEYSAMPFALFFLGEYGNMILMSGITAILFLGGWLPPVDIAPFNWIPGIIWFFLKIALIL 288

Query: 301 FMIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVA 338
           F+    +A  PRYRYDQLMRLGWKVFLP SL  VV+ A
Sbjct: 289 FVFLWVRATFPRYRYDQLMRLGWKVFLPGSLIWVVLTA 326